you can use mri_vol2vol with the --mni152reg flag. Run it with --help to 
get more info


On 11/30/17 3:54 PM, Bruce Fischl wrote:
> Hi John
>
> if your FA map is registered to the structurals (e.g. using bbregister)
> then you would just compose that transform with the talairach.xfm in the
> subject's mri/transforms dir.
>
> cheers
> Bruce
> On Thu, 30 Nov 2017, John Anderson wrote:
>
>> Dear Freesurfer experts,
>> I want to register FA map in subject space to MNI. How can I do it using 
>> freesurfer tools?
>>
>> Any advice is highly appreciated!
>> J
>>
>>
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