Works fine. thanks for the help Doug. Cheers,
Sabin Khadka
From: Douglas Greve
To: sabin khadka ; Freesurfer support list
Sent: Tuesday, January 27, 2015 12:33 PM
Subject: Re: [Freesurfer] Extract mean time series from parcellated region
That label2vol command maps the aseg
m>; Freesurfer Support List
<mailto:freesurfer@nmr.mgh.harvard.edu>
*Sent:* Monday, January 26, 2015 5:33 PM
*Subject:* Re: [Freesurfer] Extract mean time series from parcellated
region
what do you mean you can't get them? The program fails? It produces 0s?
On 1/26/15 3:48 PM, sab
, January 27, 2015 10:31 AM
Subject: Re: [Freesurfer] Extract mean time series from parcellated region
It all looks correct. How many frames does test2.nii.gz have? Try running
mri_info test2.nii.gz to see
On 1/27/15 9:05 AM, sabin khadka wrote:
Hi Doug- The command doesn't
urfer] Extract mean time series from parcellated
region
what do you mean you can't get them? The program fails? It produces 0s?
On 1/26/15 3:48 PM, sabin khadka wrote:
Hi FS user,
I am trying to extract time series of fmri rest data of certain
parcellated regions (both cortical and s
urfer Support List
Sent: Monday, January 26, 2015 5:33 PM
Subject: Re: [Freesurfer] Extract mean time series from parcellated region
what do you mean you can't get them? The program fails? It produces 0s?
On 1/26/15 3:48 PM, sabin khadka wrote:
Hi FS user,
I am trying to ex
what do you mean you can't get them? The program fails? It produces 0s?
On 1/26/15 3:48 PM, sabin khadka wrote:
Hi FS user,
I am trying to extract time series of fmri rest data of certain
parcellated regions (both cortical and subcortical). for that I am
doing following
# bbregister --s -
Hi FS user,
I am trying to extract time series of fmri rest data of certain parcellated
regions (both cortical and subcortical). for that I am doing following
# bbregister --s --mov --init-fsl --reg register.dat
--bold# mri_label2vol --aparc+aseg --subject --temp
--fillthresh 0.5 --reg regs
