sorry, we are not supporting qdec anymore. Please use the command line
tools (mris_preproc, mri_surf2surf, mri_glmfit, mri_glmfit-sim). See the
tutorials
On 10/16/2020 6:14 AM, Koustav Chatterjee wrote:
External Email - Use Caution
Hello,
I have found the following error while click
External Email - Use Caution
Hello,
I have found the following error while click on 'Generate Stats Data
Tables' to import the aseg and aparc data from the FreeSurfer-processed
group data, Could you please suggest how to overcome the issue?
[image: image.png]
Thank you,
KC
___
Hard to say. We are not supporting QDEC anymore for these types of
reasons. Can you cut and paste that mri_glmfit command into the terminal
and see what happens?
On 6/29/2020 7:05 AM, Mateus Aranha wrote:
External Email - Use Caution
Hello,
Iḿ trying to perform a group analysis usin
External Email - Use Caution
Hello,
Iḿ trying to perform a group analysis using qdec, but the analysis stops at
70% and the following error message is shown:
[image: Screenshot from 2020-06-29 13-03-27.png]
How should I proceed?
Thanks,
Mateus
__
can you cut and paste the error into the email rather than sending a
jpeg? Your image cut off the most important part
On 12/14/2015 09:54 PM, nellie wrote:
>
> Hi Freesurfer experts,
>
> When I tried to use *"Generate Stats Data Tables*" in QDEC, some
> errors came out. The related screenshot i
Dear Freesurfer experts,
I used qdec for group comparison, but there is error (acctached error.png).
I check all the files but do not find where is the erros.
Could anyone give me some suggestions?
Best,
Feng
fsid.levels
Description: Binary data
gender.levels
Description: Binary data
group
Can you send the qdec table?
doug
On 02/20/2014 11:45 AM, Miranka Wirth wrote:
> Hi FreeSurfers,
>
> I have trouble loading the .dat file into qdec, receiving the
> following error message:
> Verifying subject data.sh: 1: Syntax error: Bad fd number
> > ERROR: QdecProject::VerifySubjects: Couldn
Hi FreeSurfers,
I have trouble loading the .dat file into qdec, receiving the following
error message:
Verifying subject data.sh: 1: Syntax error: Bad fd number
> ERROR: QdecProject::VerifySubjects: Couldn't find subject 'DEM001.freesurfer'
> in
> SUBJECTS_DIR
My SUBJECTS_DIR is set correctly a
Hi Natalia,
/TemplateSub1/surf/lh.thckness.fwhm10.fsaverage.mgh
there is an 'i' missing in thckness (but that might be just a typo).
also this is a regular thickness file. You cannot analyze the thickness
in the base. That is meaningless, you need to select one of the other
files in qdec, e.g. t
Hi Natalia,
check your qdec/.QDECRC file, it needs to contain:
MEASURE1 = long.thickness-avg
MEASURE2 = long.thickness-rate
MEASURE3 = long.thickness-pc1
MEASURE4 = long.thickness-spc
probably you put a .spc instead of -spc
Best, Martin
On Fri, 2011-07-22 at 18:51 +0200, Natalia h wrote:
> Dea
Dear list,
I got an error after following the newer version of the longitudinal
stream 5.1.
long_mris_slopes worked without problems for my data which was
longtudinally processed in 4.5.
I also split the qdec.table to the cross for being able to be loaded
in qdec GUI.
Somehow I got the error th
Hi Sophy,
According to Qdec wiki page, you should also run
recon-all -s -qcache
This will create the pre-smoothed surfaces in surf/ directory.
Best wishes,
Tanja.
On Wed, Jun 29, 2011 at 3:16 AM, Sophy Zhu wrote:
>
> Hi Freesurfers,
>
> There existed an error "Error in Analyze: Couldn't open
Hi Freesurfers,
There existed an error "Error in Analyze: Couldn't open file
/usr/local/freesurfer/subjects/PD1/surf/lh.thickness.fwhm10.fsaverage.mgh",
when I clicked on the button "Analyze" in qdec design. I have only done
"recon-all" with my data (PD-MPR group and Controled-MPR group). Did I mi
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