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Dear Doug,
With some adjustments from our resident freesurfer expert, that fixed
our problem!
Thank you so much for your help.
Best,
Helena-Céline Stevelt
Danish Research Centre for Magnetic Resonance
On 2021-06-03 19:19, Douglas N. Greve wrote:
> C
Can you try an experiment for me?
cd $SUBJECTS_DIR/subject/surf
cp lh.sphere.reg lh.sphere.reg.auto # make a backup
mris_register -norot -rotate 0 0 +15 -curv rh.sphere
$FREESURFER_HOME/average/lh.folding.atlas.acfb40.noaparc.i12.2016-08-02.tif
rh.sphere.reg
Then run
recon-all -s subject -autor
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Dear Freesurfer Community,
I wish to manually reassign/edit cortical parcellation performed by FS.
We use the cortical parcellation done by FS and it has worked very well
for most of our subjects. However, we have two subjects where the
parcellation
