Re: [Freesurfer] ERROR! FOV=288.000 > 256

2022-09-07 Thread Fischl, Bruce
Yes, I think that is correct Bruce From: freesurfer-boun...@nmr.mgh.harvard.edu On Behalf Of Ellie Shaw Sent: Wednesday, September 7, 2022 7:32 PM To: Freesurfer support list Subject: Re: [Freesurfer] ERROR! FOV=288.000 > 256 External Email - Use Caution Hi, Thank you for your h

Re: [Freesurfer] ERROR! FOV=288.000 > 256

2022-09-07 Thread Ellie Shaw
External Email - Use Caution Hi, Thank you for your help! I have little prior knowledge using freesurfer can I confirm which is probably a silly question - that when adding thr -cw256 to the command line it will look like this: recon-all -subject subjectname -i invol1 <-i invol2

Re: [Freesurfer] ERROR! FOV=288.000 > 256

2022-09-07 Thread Douglas N. Greve
Yes, some of the commands inside recon-all do not support a field of view over 256mm, which yours apparently is. I keep meaning to fix this, but we only see it once a year or so and I forget. In any event, just add -cw256 to the command line. On 9/6/2022 10:51 PM, Ellie Shaw wrote: E

[Freesurfer] ERROR! FOV=288.000 > 256

2022-09-06 Thread Ellie Shaw
External Email - Use Caution Hi there, I am attempting to perform the recon-all command for my T1 nii file. When I run the recon-all command I get the following error message: ERROR! FOV=288.000 > 256 Include the flag -cw256 with recon-all! Inspect orig.mgz to ensure the head