Re: [Freesurfer] EPI Factor generated by dmri_bids_config

2023-06-27 Thread Blujus, Jenna
External Email - Use Caution Hi all, Thanks for the reply. Can you clarify how the EPI factor is being used by Freesurfer's trac-all -prep workflow? I believe that the trac-all -prep workflow is using the EPI factor and echo spacing to compute the readout time for the acqp.txt fil

Re: [Freesurfer] EPI Factor generated by dmri_bids_config

2023-06-25 Thread Glasser, Matt
list Date: Sunday, June 25, 2023 at 8:29 AM To: "freesurfer@nmr.mgh.harvard.edu" Subject: [Freesurfer] EPI Factor generated by dmri_bids_config External Email - Use Caution Hi all, I am using TRACULA (v7.3.2) to examine longitudinal changes in WM integrity by diagnostic groups.

[Freesurfer] EPI Factor generated by dmri_bids_config

2023-06-25 Thread Blujus, Jenna
External Email - Use Caution Hi all, I am using TRACULA (v7.3.2) to examine longitudinal changes in WM integrity by diagnostic groups. For preprocessing, I did not use topup because my data have a single acquisition (i.e., I do not have two acquisitions with opposing polarities o