You can use mri_vol2surf, something like
mri_vol2surf --closest-vertex x y z coords ltafile surf outfile
where xyz is a coordinate (eg, the center or edge or you lesion).
coords: 1=scanner,2=tkreg (you can pick the xyz from the freeview
scanner or tkreg ras)
if these coordinates are in the same s
External Email - Use Caution
Dear Freesurfer Experts,
I would like to inquire if there is a FreeSurfer command that allows me to
measure the distance (in voxels or mm) between a lesion mask (output of
samseg) and the closest voxels in the ribbon after applying "recon-all" to
T1 ima
External Email - Use Caution
Dear FreeSurfer experts, I would like to know if there is a command in
FreeSurfer that can help me measure the distance (in voxels or mm) between
a lesion mask and the closest voxels in the ribbon after applying recon-all
to T1 images. Thanks for your a
