Re: [Freesurfer] DTI question

2015-02-12 Thread ayendiki
* Mittwoch, 11. Februar 2015 um 17:39 Uhr >> *Von:* "Anastasia Yendiki" >> *An:* "Freesurfer support list" >> *Betreff:* Re: [Freesurfer] DTI question >> Hi Tom - These are reasonable values for mean diffusivity (a.k.a. >> ADC). Only FA is normalized t

Re: [Freesurfer] DTI question

2015-02-12 Thread Douglas N Greve
? > Thanks a lot, Tom > *Gesendet:* Mittwoch, 11. Februar 2015 um 17:39 Uhr > *Von:* "Anastasia Yendiki" > *An:* "Freesurfer support list" > *Betreff:* Re: [Freesurfer] DTI question > Hi Tom - These are reasonable values for mean diffusivity (a.k.a. > ADC).

Re: [Freesurfer] DTI question

2015-02-11 Thread Thomas Potrusil
have any suggestions how I can get more decimal places on a .stats file? Thanks a lot, Tom   Gesendet: Mittwoch, 11. Februar 2015 um 17:39 Uhr Von: "Anastasia Yendiki" An: "Freesurfer support list" Betreff: Re: [Freesurfer] DTI question Hi Tom - These are reasonable values

Re: [Freesurfer] DTI question

2015-02-11 Thread Anastasia Yendiki
Hi Tom - These are reasonable values for mean diffusivity (a.k.a. ADC). Only FA is normalized to take values in the 0-1 range. a.y On Wed, 11 Feb 2015, Thomas Potrusil wrote: Dear FreeSurfers! A question concerning DTI analysis came up:   I already run dt_recon on my dataset which works ver

[Freesurfer] DTI question

2015-02-11 Thread Thomas Potrusil
Dear FreeSurfers! A question concerning DTI analysis came up:   I already run dt_recon on my dataset which works very well. I also used the output to extract FA-values of distinct ROIs - no Problem. Now I want to do the same for ADC but I only get values in my .stats files like 0.0007 or 0.0008

Re: [Freesurfer] DTI question

2012-06-27 Thread Anastasia Yendiki
Not sure if this is the simplest way but mri_convert --split, followed by mri_concat, should do it. You'll also have to remove the respective gradient directions from the gradient file. Hope this helps, a.y On Wed, 27 Jun 2012, Drottar, Marie wrote: > I have a DTI dataset with 10 b0 and gra

[Freesurfer] DTI question

2012-06-27 Thread Drottar, Marie
I have a DTI dataset with 10 b0 and gradient 30 directions. I would like to remove one or two volumes from the dataset and then repackage the data. How do I do this? thank you Marie Drottar, MA Research Assistant Division of Newborn Medicine Fetal-Neonatal Neuroimaging & Developmental Sci

[Freesurfer] DTI question

2010-11-08 Thread Gabriel Go.Es.
Hello Freesurfers I'm starting to work with DTI data and I have a couple of questions; I have 2 identical DTI sequences for some subjects and I would like to work with them, does anyone knows if it's better to concatenate them or to make an average of them? And I'm wondering when I mak

[Freesurfer] DTI question

2010-11-08 Thread Gabriel Go.Es.
Hello Freesurfers I'm starting to work with DTI data and I have a couple of questions; I have 2 identical DTI sequences for some subjects and I would like to work with them, does anyone knows if it's better to concatenate them or to make an average of them? And I'm wondering when I make a