Re: [Freesurfer] COR-files

2007-11-05 Thread Xiangchuan Chen
1-05Time: 10:05:47 From: Chris Watson ([EMAIL PROTECTED]) To: freesurfer@nmr.mgh.harvard.edu (freesurfer@nmr.mgh.harvard.edu) Subject: [Freesurfer] COR-files >Hello, this is my first time using Freesurfer. > >I was making some edits to the brainmask.mgz and T1.mgz volumes, and

Re: [Freesurfer] COR-files

2007-11-05 Thread Bruce Fischl
yes, but I would copy the brainmask.mgz first to make sure you don't regret writing over it. On Mon, 5 Nov 2007, Chris Watson wrote: So in place of I should place brainmask.mgz? I believe that is the volume I saved over. It's unfortunate that I'll have to re-do the edits to the T1.mgz volume

Re: [Freesurfer] COR-files

2007-11-05 Thread Chris Watson
So in place of I should place brainmask.mgz? I believe that is the volume I saved over. It's unfortunate that I'll have to re-do the edits to the T1.mgz volume... thanks, Chris Bruce Fischl wrote: Hi Chris, in the future you should just save over the .mgz files. So they were saved directly

Re: [Freesurfer] COR-files

2007-11-05 Thread Bruce Fischl
Hi Chris, in the future you should just save over the .mgz files. So they were saved directly in mri and not in a subdir? That means that there is only one volume, not two (brainmask.mgz and T1.mgz), do you know which one it is? To convert from cor to .mgz do: mri_convert cheers, Bruce

[Freesurfer] COR-files

2007-11-05 Thread Chris Watson
Hello, this is my first time using Freesurfer. I was making some edits to the brainmask.mgz and T1.mgz volumes, and saved them and left Friday evening. I would like to continue making edits today. How do I open these volumes so that they include the edits I made? When I saved, 256 COR-files we