Hi Chris,
in the future you should just save over the .mgz files. So they were saved
directly in mri and not in a subdir? That means that there is only one
volume, not two (brainmask.mgz and T1.mgz), do you know which one it is? To
convert from cor to .mgz do:
mri_convert <directory that has the COR files> <output volume.mgz>
cheers,
Bruce
On Mon, 5 Nov 2007, Chris Watson wrote:
Hello, this is my first time using Freesurfer.
I was making some edits to the brainmask.mgz and T1.mgz volumes, and saved
them and left Friday evening. I would like to continue making edits today.
How do I open these volumes so that they include the edits I made? When I
saved, 256 COR-files were created in the SUBJECTS_DIR/<subject>/mri
directory. Do I use mri_convert? If so, what is the syntax?
mri_convert --in_type cor COR-001 --out_type spm ???
Thanks,
Chris
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