Hi David,
recon-all -base -autorecon-pial
should be enough to pick up both edits (probably you already looked at
the tutorial at
http://ftp.nmr.mgh.harvard.edu/fswiki/FsTutorial/LongitudinalTutorial
that describes most edits). Don't forget to re-run all longitudinals
from scratch after you d
We have recently run a set of longitudinal data (FreeSurfer5.3) and are making
edits to the base pial surfaces. It is clear that there are two different ways
of doing pial edits including: 1. editing the brainmask.mgz and 2. the
brain.finalsurfs.mgz. I recognize that they are specific ways to