Hi Thomas,
no, all the values are in individual subject space.
cheers
Bruce
On Mon, 17 Mar 2014,
Thomas PAUL wrote:
Okay thank you Bruce for your quick answer. I have one more question. I went
through the whole ReconAllTable, and I can't find
the answer:
Based on what I read, I think that
Okay thank you Bruce for your quick answer. I have one more question. I
went through the whole ReconAllTable, and I can't find the answer:
Based on what I read, I think that all the volumes created by freesurfer
(all the outputs) have had the Tailarach transform applied to them? So when
I have ext
yes
On Sat, 15 Mar 2014, Thomas PAUL wrote:
Thank you Bruce for your help, it works. I didn't noticed that
mri_extract_label existed.
So just to be sure, the output volume is not a mask, right? If I want to
convert it to a mask, I use mri_binarize ?
Thomas Paul.
On Fri, Mar 14, 2014 at 2:51 P
Thank you Bruce for your help, it works. I didn't noticed that
mri_extract_label existed.
So just to be sure, the output volume is not a mask, right? If I want to
convert it to a mask, I use mri_binarize ?
Thomas Paul.
On Fri, Mar 14, 2014 at 2:51 PM, Bruce Fischl wrote:
> Hi Thomas
>
> you are
Hi Thomas
you are probably better off getting it right out of the aseg.mgz. The cc
labels in it are:
#define CC_Posterior 251
#define CC_Mid_Posterior 252
#define CC_Central253
#define CC_Mid_Anterior 254
#define CC_Anterior 255
so you should just be able to run mri_extr
Dear FreeSurfer experts,
I've been using FreeSurfer for 2 months now, and I have a question on how
to proceed to do the following thing:
My goal is to obtain the CRS coordinates of the corpus callossum.
Here is what I was thinking to do, based on what I read:
1. Annotation to segmentation:
m
