Re: [Freesurfer] freesurfer and debian "etch"

2006-02-24 Thread wilms
ut its worth a try. > > Nick > > > On Wed, 2006-02-22 at 10:58 +0100, wilms wrote: > >>Dear all, >> >>does someone out there run freesurfer >>(freesurfer-Linux-rh9-dev20060210-full.tar.gz) under debian etch? >>Installation runs smoothly, however, wh

[Freesurfer] freesurfer and debian "etch"

2006-02-22 Thread wilms
00) /lib/ld-linux.so.2 (0xb7feb000) # "sarge" machine: # libstdc++.so.5 => /usr/lib/libstdc++.so.5 (0xb7785000) /lib/ld-linux.so.2 => /lib/ld-linux.so.2 (0xb7fea000) Does this mean that the c++ libraries on my etch-running machine are "too" new? Why is there no

[Freesurfer] problems generating the filled volume

2005-04-26 Thread wilms
Dear freesurfers, when I check my mri_converted data after running (1) using I find my data shifted relative to the voxel space center (volume index at [128 128 128]) as can be seen in the attached screenshots. The subsequent generation of the "filled" images leaves the cerebellum always attached

[Freesurfer] "consider relinking" warnings

2005-04-21 Thread wilms
:30 CEST 2005 mri_convert orig nu/nu0.mnc mri_convert orig nu/nu0.mnc reading from orig... TR=0.00, TE=0.00, TI=0.00, flip angle=0.00 i_ras = (-1, -0, -0) j_ras = (0, 0, -1) k_ras = (-0, 1, -0) writing to nu/nu0.mnc... nu_correct -clobber nu/nu0.mnc nu/nu1.mnc [EMAIL PROTECTED]:/data/Wilms/projects/freesurfer