Still working thru these steps with a 0.5 mm monkey volume...I've run mri_nu_correct with no problem, set my control points, and then I run mri_normalize as follows:mri_normalize –monkey –f control.dat -g 1 nu.mgz T1.mgzbut I end up with a 1mm resampled volume with a poor normalization.anything I c
I just installed the latest release on my mac ox 10.4
Trying to set control points on a monkey volume, and something wierd
keeps happening... I will middle-click to set the control point, and
the green cross will appear, but when I move to another location to
set another control point, the
lieve Bruce has recommended 10-15 brains as a sufficient number. best,-OlegOn Mon, 7 Nov 2005, Mark Pinsk wrote: I remember Oleg Gusyatin posted some time ago about wanting to make amacaque parcellation.Just wondering if that was ever done, and if so, would it be accessible tousers by any chance :) ?I
I remember Oleg Gusyatin posted some time ago about wanting to make a macaque parcellation.Just wondering if that was ever done, and if so, would it be accessible to users by any chance :) ?I know I can use Caret, but we're all using freesurfer for human data here so I was just wondering.
thx- mark
That was the right hemisphere sphere (tksurfer subjid rh sphere).Yep all three things you listed look great, so I think I'm good.thanksmark
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No the workflow doesn't tell me to, I just was looking thru all the
surfaces to see how they look. Yes the topology correction was run.
So here's a snapshot of what the sphere looks like, and you can see
something on the sphere surface, so I just thought it was a defect.
thanks! mark(not sure if
I just finished going thru the wiki's 'recommended' workflow with one of my subjects, which is just great !It tells me to use tkmedit to check my wm and pial surfaces after autorecon2. I did and they looked pretty good (nothing caught my eye to have to fix). However when autorecon3 completed, I c
Hi, I just tried a fresh installation of freesurfer on a new OS X Tiger machine.
Turns out that Fink is not longer offering the dlcompat library for download.
Can anyone wrap those binaries up and send them to me, or post them
for download by any chance?
thanks so much!
Mark
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