Dear freesurfer users,
After running recon-all for all subjects, I started running qcache using the
following commands:
(in the subject directory)
foreach i (*)
recon-all -s $i -qcache
end
However, the process was terminated/stopped. Is there a way to resume the
process (like what you will ha
:42 am
Subject: Re: [Freesurfer] Subcortical Volume Calculation
To: Hui J Yu
Cc: freesurfer@nmr.mgh.harvard.edu
> yes, we do a partial volume correction of the volumes,
> accounting for the fraction of the structure in each border voxel.
>
> cheers
> Bruce
> On Mon, 15 Feb 20
Dear Freesurfer users,
I am wondering how are the volumes calculated from stats such aseg.stat. When
I export the aseg and do a voxel count and multiple the volume per voxel, my
total volume is different from that is given by the stats. For example, the
hippocampal volume given by aseg.stats
Dear Freesurfer Experts,
I have ran recon-all on a T1 SPGR image of a control subject without error.
The outputs look reasonable (visually). However, the numbers I got from
aseg.stats do not make sense (they are way off). Any thoughts?
# Title Segmentation Statistics
#
# generating_program
Dear freesurfer users,
I have recently downloaded freesurfer (virtualbox verion) and started testing
using the sample data bert. I got the following error (I also tried on my data
and the same error occured). Any suggestions?
FINAL ITERATIVE TEMPLATE DEFORMATION
Compute Lo
