Re: [Freesurfer] Fwd: mpr2mni305 failed error

2014-08-20 Thread Francesco Deleo
them as well? Is this the average of more than one run? > You should check the mri/orig/00?.mgz volume(s) as well > > On Fri, 8 Aug 2014, Francesco Deleo wrote: > > >> -- Forwarded message -- >> From: Francesco Deleo >> Date: 2014-08-08 18:06 GMT+02:

[Freesurfer] Fwd: mpr2mni305 failed error

2014-08-08 Thread Francesco Deleo
-- Forwarded message -- From: Francesco Deleo Date: 2014-08-08 18:06 GMT+02:00 Subject: Re: [Freesurfer] mpr2mni305 failed error To: freesurfer It is not ok... It seems to have a contrast problem... I can send a snapshot, or if you want I can send the rawavg.mgz Francesco

Re: [Freesurfer] mpr2mni305 failed error

2014-08-08 Thread Francesco Deleo
gain Francesco 2014-08-07 17:16 GMT+02:00 Douglas N Greve : > Have you looked in transforms/talairach_avi.log? > > On 08/07/2014 07:57 AM, Francesco Deleo wrote: > > Thank you Doug! > > but i tried it in many cases but I've always received the same error > > m

Re: [Freesurfer] mpr2mni305 failed error

2014-08-07 Thread Francesco Deleo
Thank you Doug! but i tried it in many cases but I've always received the same error message... Is there something else I can try? Francesco 2014-08-07 0:46 GMT+02:00 Douglas N Greve : > Try it with -notal-check > doug > > On 08/06/2014 04:39 PM, Francesco Deleo wrote: > &

[Freesurfer] mpr2mni305 failed error

2014-08-06 Thread Francesco Deleo
I all! I am a new freesurfer user. I have a problem when I perform the recon-all -all, in about 15% of MRI scans, all made with the same scanning protocol (T1 MPRAGE in a SIEMENS Avanto 1,5 T). I can't recognize any difference between those scans which work correctly and those not. I have never f

[Freesurfer] mpr2mni305 failed

2014-07-31 Thread Francesco Deleo
ta.local 13.3.0 Darwin Kernel Version 13.3.0: Tue Jun 3 21:27:35 PDT 2014; root:xnu-2422.110.17~1/RELEASE_X86_64 x86_64 Thanks for your attention Francesco Deleo Milan, Italy - FREESURFER_HOME: /Applications/freesurf

[Freesurfer] Fwd: mpr2mni305 failed error

2014-07-30 Thread Francesco Deleo
ta.local 13.3.0 Darwin Kernel Version 13.3.0: Tue Jun 3 21:27:35 PDT 2014; root:xnu-2422.110.17~1/RELEASE_X86_64 x86_64 Thanks for your attention Francesco Deleo Milan, Italy - FREESURFER_HOME: /Applications/freesurf