Re: [Freesurfer] T2 or FLAIR data to improve pial surfaces

2020-07-20 Thread Batra, Vinita R.
*EXTERNAL EMAIL: EVALUATE* External Email - Use Caution What is the resolution of these images? Matt. From: on behalf of "Batra, Vinita R." Reply-To: Freesurfer support list Date: Monday, July 20, 2020 at 11:13 AM To: Freesurfer support list Subject: [Freesurfer] T2 or FLAIR

[Freesurfer] T2 or FLAIR data to improve pial surfaces

2020-07-20 Thread Batra, Vinita R.
External Email - Use Caution Dear FreeSurfer experts, I have both T2 and FLAIR images for the majority of the subjects in my study, and I want to use them to improve pial surface reconstruction during recon-all as explained in [1]. My questions are: 1) In general, should I prefe

[Freesurfer] TRACULA prep roc error

2020-05-04 Thread Batra, Vinita R.
External Email - Use Caution Hello team, I have encountered the following error while running the tracula pre-processing command and was hoping you could help me understand how to correct this. #@# Image corrections Sat May 2 19:57:18 CDT 2020 mri_convert --bvec-voxel /U

[Freesurfer] Bad CPU type in executable

2020-04-20 Thread Batra, Vinita R.
External Email - Use Caution Hello Freesurfer experts, I am currently running into an issue that I can’t seem to resolve. Is this due to incompatibilities with Mac OS Catalina ? I have the 6.0 version of Freesurfer. Would it work better with the 7.0 beta version of Freesurfer ?

[Freesurfer] Tutorial Data Error Message

2020-04-01 Thread Batra, Vinita R.
External Email - Use Caution Hello FreeSurfer Team, When I run the test_commands.sh.15 I get the following error message as shown below. dyld: Library not loaded: /usr/X11/lib/libGLU.1.dylib Referenced from: /Applications/Imaging/freesurfer/bin/mri_probedicom Reason: image