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Equal to that of the T1
From: <freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of "Glasser, Matthew"
<glass...@wustl.edu>
Reply-To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Date: Monday, July 20, 2020 at 11:42 AM
To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Subject: Re: [Freesurfer] T2 or FLAIR data to improve pial surfaces
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What is the resolution of these images?
Matt.
From: <freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of "Batra, Vinita R."
<vba...@lsuhsc.edu>
Reply-To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Date: Monday, July 20, 2020 at 11:13 AM
To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Subject: [Freesurfer] T2 or FLAIR data to improve pial surfaces
External Email - Use Caution
Dear FreeSurfer experts,
I have both T2 and FLAIR images for the majority of the subjects in my study,
and I want to use them to improve pial surface reconstruction during recon-all
as explained in [1].
My questions are:
1) In general, should I prefer FLAIR over T2, or the other way around?
2) Some subjects (< 10%) do not have a FLAIR image, and others do not have a
T2. Do you think that it is fine to use FLAIR for some subjects, and T2 for
others, in the same study? We will perform manual QC after the recon-all run
and exclude bad quality images so I wanted to hear your opinion.
Best,
VB
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