Re: [Freesurfer] mri_convert: Segmentation fault (core dumped) synthsr scan

External Email - Use Caution  It might help if you could send along the crash report as an attachment. -R. On Sep 15, 2023, at 14:36, KennethSPrice wrote:External Email - Use CautionUpdate: I tried running recon-all (5.1, ubuntu 18

Re: [Freesurfer] mri_convert: Segmentation fault (core dumped) synthsr scan

External Email - Use Caution Update: I tried running recon-all (5.1, ubuntu 18) on a sample MPRAGE scan and got the "mri_convert: segmentation fault (core dumped)" error again. Any clarity on this issue would be appreciated. Thanks, K --- Original Message --- On Thursday

[Freesurfer] Postdoctoral Position in Advanced Clinical Neuroimaging of Aging, Dementia, TBI, and PTSD in Veterans

External Email - Use Caution *Postdoctoral Position in Advanced Clinical Neuroimaging of Aging, Dementia, TBI, and PTSD in Veterans* *Applicants must be US Citizens* *Location:* VA Boston Healthcare System, Boston, MA *Affiliated Laboratories and Investigators: * Translat

[Freesurfer] SynthSeg QC - Reliable cut-off?

External Email - Use Caution Hi, We're trying SynthSeg on data that has been improved using SynthSR. We are interested in the intracranial volume per se. I am curious how we can approach the QC metrics. Our first guess was to get an average for the QC metric of grey matter, white

Re: [Freesurfer] [FreeSurfer] regeneration of aseg.stats from manually edited aseg.mgz

External Email - Use Caution Dear FreeSurfer experts, I would like to further follow up with this issue - I tried to run the following command as instructed on https://secure-web.cisco.com/1DoD2qpUJoxGcDNOZSB1YhPJsD5GKpgHYq9R-yPlq1zTC_qaqWxFji3HTjaKE6hz8E9Az-p_XziNeB7-nmb2je3J9g