[Freesurfer] Yeo atlas for children!

2021-06-18 Thread Martin Juneja
External Email - Use Caution Dear experts, I used Yeo's 17-network parcellation to study the association between network-wise cortical volume and a clinical variable in adolescents. I received the following two questions from the reviewers regarding the use of Yeo's atlas. I would

Re: [Freesurfer] External 3D View Issue

2021-06-18 Thread Fischl, Bruce
Hi Harriet Is that a parcellation overlaid on the brain? Usually this means something was not regenerated when you reran (like the parcellation). Try just recreating it an see if it fixes your problems. Should just take a couple of min to run just the parcellation stage Cheers Bruce From: fre

[Freesurfer] Seeing "Include the flag -cw256 with recon-all!" for HCP 7T data

2021-06-18 Thread Soichi Hayashi
External Email - Use Caution Hello. I am having a problem running freesurfer on a HCP 7T data and I am wondering if someone from this mail list could help me out. I am trying to run freesurfer (v7.1.1) and I am seeing the following error message. *