Hi Sekar,
Just use one label at a time.
Then you will need to move all of these into diffusion space before using them
for tractography.
Lilla
From: freesurfer-boun...@nmr.mgh.harvard.edu
on behalf of A.R. Sekar
Sent: Sunday, May 16, 2021 7:05 PM
To: Freesur
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Hello experts,
I am doing cerebellar segmentation from one of my previous posts using the
command:
isolate_labels.csh --vol aparc+aseg.mgz --outprefix aparc+aseg_labels --L
$label 7,8,46,47
Following the command I am getting an expression syntax err
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Hello,
I am using Freesurfer7.1.1 ("docker pull freesurfer/freesurfer:7.1.1").
The docker command I'm using is:
docker run -it --platform linux/amd64 freesurfer_gui
Thanks,
Lara
From: freesurfer-boun...@nmr
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Dear Freesurfer users,
Prof Garibotto’s group, Laboratory of Neuroimaging and Innovative Molecular
Tracers (
https://secure-web.cisco.com/1f690DlehlIiGMbMNMyi9vyUen43cL9dNElX6oldhDASYv3zphdMaRCO8VQ5oDlA0NSBdg3oA8LD4SUwT9_IYSWjHWXho23Krju1RUUAukqXDvP7WT
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Dear Freesurfer team,
I am currently preparing my first fMRI study and used OptSeq2 for
creating the trial sequence. Since I am not experienced with the study
design in MRI (I mainly conducted EEG studies so far), I would like to
have your professio
Hi Sara
I guess it depends on where the MNI coordinates come from. I believe there is a
DK parcellation of the fsaverage surface, which is in MNI coords. Look in the
label dir
Cheers
Bruce
From: freesurfer-boun...@nmr.mgh.harvard.edu
On Behalf Of Romanella,Sara (BIDMC -
Wilkinson - Neurolog
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Thank you! --Donna
From: on behalf of "Douglas N. Greve"
Reply-To: Freesurfer support list
Date: Sunday, May 16, 2021 at 9:59 AM
To: "freesurfer@nmr.mgh.harvard.edu"
Subject: Re: [Freesurfer] Sulcus represented in wm.mgz filled in lh.white
* Ext
