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Hi Kersten,
Thanks for the reply. I think I am trying to understand the steps that follow.
Do I have to check whether my model with 2 random effects (intercept and time)
is better than that with one (intercept)?
For the contrast I am interested in g
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Dear FreeSurfer experts:
I cannot fix the problem that I mention in the subject. I put the output of the
terminal below. I was doing functional connectivity analysis walkthrough
tutorial and I followed until group analysis when applying "isxconcat-ses
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thank you for your detailed and helpful explanation.
question 3: I mean just left and right. But what should I do if I want to
consider subcortical as well as left and right?
Best Regards
Hengameh
On Thu, Mar 12, 2020 at 12:07 AM Douglas N. Greve
wr
Hello FreeSurfer Experts,
I'm attempting to install Freesurfer. I am trying to test my installation.
$>recon-all -i sample-001.nii.gz -s bert -all
$>recon-all -s bert finished without error at
Wed Mar 11 19:09:43 EDT 2020
done
However, after this I am getting an error message
Hi Freesurferers
I am trying to run selxavg3-sess for a single subject (3T fMRI data). Oddly,
the terminal output shows that it doesn't need updating for preprocessing and
ends with this: "Started at Thu Mar 12 10:48:09 EDT 2020
Ended at Thu Mar 12 10:48:12 EDT 2020 preproc-sess done". It s
Hi Frank
sorry, I've been busy with local deadlines that are over now. Can you send
us the recon-all.log file? Or tar and gzip the entire subject dir and
upload it to our ftp site? Apologies if any of this has been done.
cheers
Bruce
On Thu, 12 Mar 2020, Frank Chau wrote:
External
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Hello Swati,
your points 1-4 look fine, as far as I can see.
Regarding 5, the recommended spatiotemporal mass-univariate approach consists
of calling three functions:
lme_mass_fit_EMinit, lme_mass_RgGrow, lme_mass_fit_Rgw
in that order. If that d
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Dear FS experts,
I am looking at the relationship between the cortical thickness and a
behaviour measure, while controlling for the effects of age and gender. In
this analysis, I am using CT_AT.fsgd, contrast_pos.txt and a
contrast_neg.txt.
GroupDescr
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Dear Douglas ,
How could I find out the root cause of this recon-all "exited with ERRORS"?
Does it mean there are flaws in the generated output? Or I could ignore this
error warning? Thank you.
Regards
Frank
