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Without taskset ? Just open terminal and type recon-all -i x -s y -all for
each subjects?
Il lun 25 giu 2018, 23:43 Douglas N. Greve ha
scritto:
> If you have 10 processors and enough memory, then you should run 10
> simultaneously (ie, without usin
If you have 10 processors and enough memory, then you should run 10
simultaneously (ie, without using -openmp).
On 06/25/2018 05:34 PM, Ottavio Morciano wrote:
>
>
> Hi!I'am a student of medicine in Foggia,Italy.To elaborate a single
> .nii file for a single subjects i use "recon-all -i (name
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Hi!I'am a student of medicine in Foggia,Italy.To elaborate a single .nii
file for a single subjects i use "recon-all -i (name of .nii file) -s (name
of subjects) -all -openmp 8(i have 8 core)"and to finish the work is
necessary 8 hours.
Now i want elab
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Hello FreeSurfer experts,
I previously emailed regarding processing longitudinal data in v6.0 using bases
with manual edits that had been completed in v5.3. I went ahead and ran
recon-all -all on the base of a subject (originally generated in v5.3)
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Hi Bruce,
Thank you so much for your prompt help. Can I achieve that with:
tkregisterfv --mov [your volume maps] --regheader --s [the subject on whose
surface map is registered] --surfs --reg [file name]
Best,
Srishti
Best,
Srishti
Social/Clinical R
Hi Srishti
you should be able to load the volumetric maps with the surfaces and make
sure that your clusters are contained within the surface.
cheers
Bruce
On Mon, 25 Jun
2018, srishti goel wrote:
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They are separate clusters not the same cluste
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They are separate clusters not the same clusters but we both of those don't
show up when we project the volume maps on surface. Every other cluster
comes up and this has happened in about 2-3 files. Are you absolutely sure
that the surface in freesurfer
You have to have a separate command line for each one, but you can
always write a script to do that, eg
foreach subject (subjeta subjectb )
recon-all -s $subject -qcache
end
On 6/19/18 10:53 AM, Heidi Lindroth wrote:
I did not. Can I re-run a batch of scans with the -qcache command
Are you doing 5 different tests or just one test? It is a tricky
question as to whether you should correct across 5 tests or not.
Ideally, one should, but I don't think I've ever seen it done in
practice. As a reviewer, I might not demand it for only 5 tests.
On 6/20/18 9:17 AM, jahanvi pat
sorry for the delay. There is not a super easy way to do this, but it is
possible in matlab. cd into the glmdir folder and start matlab, then
X = load('Xg.dat');
beta = MRIread('beta.mgh');
betamat = fast_vol2mat(beta);
yhatmat = X(:,[i j k m n])*betamat([i j k m n],:);
yhat = beta;
yhat.vo
It should be included. But dACC and insula are not close to each other.
How can there be a cluster that spans both?
On 6/23/18 7:54 PM, srishti goel wrote:
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Hello,
I am using mri_vol2surf to project my volume maps on to the surface.
There is a dACC/insul
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