Re: [Freesurfer] Any updates on recon-all GPU support?

2016-06-26 Thread Derek Pisner
Hi Richard: Was not able to resolve this quite yet. I figured out that I had to backtrack a bit because I was having trouble getting the complete set of data files from the Fs ftp server using "git annex ." And now it appears that freesurfer's entire ftp server is down and has been all day. I w

Re: [Freesurfer] Any updates on recon-all GPU support?

2016-06-26 Thread R Edgar
On 24 June 2016 at 05:34, R Edgar wrote: > On 23 June 2016 at 22:44, Derek Pisner wrote: > >> Fixed the gcc problems as well (this required a tweak to host_config.h in >> /usr/local/cuda/include). Now, I've hit another roadblock: >> >> Makefile:4542: recipe for target 'libutils_cuda_a-mrisurf.o'

[Freesurfer] PVE correction tool on Freesurfer 6

2016-06-26 Thread Lee Subin Kristine
Hello, I am trying to use PVE correction on preprocessed PET data downloaded from the Alzheimer's Disease Neuroimaging Initiative(ADNI) database. I have a couple of questions: 1) I am using the co-registered, averaged image of the dynamic images, and it seems from your answers here (https://w