There should be a few more lines at the top of the log file, showing the
exact trac-all command line that was executed, etc. Is this the entire log
file?
On Sat, 3 Jan 2015, Katherine Damme wrote:
Here is the log.
On Sat, Jan 3, 2015 at 9:19 AM, Anastasia Yendiki
wrote:
It looks l
I think you can only do autorecon1 and 2 separately for each hemi
doug
On 1/2/15 4:39 AM, pradeep mahato wrote:
Hello experts,
I ran recon-all -all -hemi lh -s, it failed due to some
rh.white file missing .
Can someone tell me how i can run autorecon1 , autorecon2 and
autorecon3 separately fo
Here is the log.
On Sat, Jan 3, 2015 at 9:19 AM, Anastasia Yendiki <
ayend...@nmr.mgh.harvard.edu> wrote:
>
> It looks like it's not finding the file that you specify - not like it's
> finding it but it's in the wrong format. But I can't tell just from one
> line, I need to see the entire output
Hi Jon
Your contrast matrixdepends on the hypothesis you want to test. Contrast
matrices for lmeare specified in the same way as for the General Linear
Model.Nothing different here.It's a matrix of Lrows where L>=1 and the same
number of columns as the number offixed effects (population paramete
Hi Ali-Reza
I'm not sure I understand the problem. In the images you sent it looks to
me like all the zero voxels are not part of brain tissue, but are rather
either ventricular or sulcal csf
cheers
Bruce
On Fri, 2 Jan 2015, Ali-Reza
Mohammadi-Nejad wrote:
Hi FreeSurfer experts,
I am
It looks like it's not finding the file that you specify - not like it's
finding it but it's in the wrong format. But I can't tell just from one
line, I need to see the entire output of trac-all, which is saved in
trac-all.log.
On Fri, 2 Jan 2015, Katherine Damme wrote:
I still get the err
