Hi,
I was wondering if it's possible to sample x mm from the pial surface using
mri_vol2surf (or another tool!). The point is that I'd like to be agnostic
about exactly where the grey/white matter boundary lies.
I've had a look through the help for mri_vol2surf and nothing's jumping out
at me, is
Dear all,
I'm currently trying to view face and/or vertex normals in freeview (of an
existing surface). I've seen the option to load "vector display" data, but I do
not know the format of such a file.
Can someone help me with that issue?
Regards,
Daniel
Universitätsklinikum Jena - Bachstrasse
I tried, here is the command:
mris_make_surfaces -cover_seg mri/aseg.mgz subjid lh
and the last 5 lines of the run:
...
smoothing surface for 5 iterations...
repositioning cortical surface to gray/csf boundary.
smoothing T1 volume with sigma = 2.000
creating distance transform volume from segmen
Hi Octavian
You should try it and see. It's hard to predict how it will do
Cheers
Bruce
> On Nov 26, 2014, at 4:43 PM, Lilla Zollei wrote:
>
>
> Hi, Could you use a colormap for your aseg? It is really hard to see the
> different ROIs on a grayscale image.
> Thanks, Lilla
>
>> On Wed, 26 No
Hi Satra,
that was really helpful... I patched 5.3.0, made a full run of recon-all with
strace and wrote a little tool that checks which files must actually be part of
the archive.
I can confirm your file list, but there is a problem with fsaverage (you have
already expressed your concerns) be
Dear Freesurfer experts,
Could you please give me more detail of "-fsd"? It is asked to "specify a
functional subdirectory with -fsd" when i preprocess the functional data.
If, for example, the current directory is /home/Proj, the f.nii is in
/home/Proj/sess01/bold/002/ and /home/Proj/sess01/bold/
Dear Freesurfer experts,
I've been using Freesurfer on Mac computers for some years with great
satisfaction. I just bought a "monster computer", a Mac Pro with 12-core Xeon
E5, 64 Gb RAM, GPU AMD FirePro D700. This is, out of doubt, a marvellous
machine to compute many subjects simultaneously, b
