[Freesurfer] Command '-qa' in TRACULA

2014-11-09 Thread Anri WATANABE
Dear FreeSurfer experts, I'm running pre-processing steps in TRACULA separatelly and could neither find the context about quality assessment step nor run the command 'trac-all -qa -c . I downloaded TRACULA in FreeSurfer 5.3, MacOSX lion (64-bit). Could anyone solve this problem? Thank you. Anri

Re: [Freesurfer] edit failure

2014-11-09 Thread Bruce Fischl
Hi Octavian If you upload the subject we will take a look Cheers Bruce > On Nov 9, 2014, at 10:40 PM, Octavian Lie wrote: > > Dear all, > > 1. in the attached there is a gyrus that does not incorporated into surfaces, > whatever I do (wm edits/topological defects-cloning voxels from brainma