Dear experts
when I open freeview, it report that "2014-07-21 11:22:28.453
Freeview[10414:303] invalid drawable". Afterwards, when I click on Show
Color Scale, the color bar was in black alternating with white. How should
I solve this problem?
Thank you
Hao Lei (new learner of freesurfer)
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Dear experts
When I do Segmentation of hippocampal subfields, it report that
ERROR:connot find /nfs/preproc/muti_first/s
What should I do next?
THe scripts was following:
SUBJECTS_DIR=/nfs/preproc/multi_first
subject_list=${SUBJECTS_DIR}/scripts/check/hipp.list
## Get subjects
Hi Stefano,
Here's what you can do. In your shell (assuming you are using c shell)
# First set variable s to be subject id
>> set s = 100306_QD95CU_FS
# set freesurfer environmental variable SUBJECTS_DIR to point to where
the data is
>> setenv SUBJECTS_DIR /share/users/imganalysis/yeolab/data/GS
Hi Sourav
Are you sure the skull stripping isn't working? It can be hard to tell right on
the midline
Cheers
Bruce
> On Jul 18, 2014, at 5:38 PM, SOURAV RANJAN KOLE wrote:
>
> Sourav
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Hello Freesurfer experts
I am trying to edit an aseg file. I want to set my brush value to a value that
does not exist in the default lookup table (e.g,. 570). So, I edited the
lookup table, saved this , and loaded it in freeview. My new label and brush
value is now visible. However when I s
Hi list and Thomas,
I'm running the first step to use Yeo's parcellation. The running is wrong.
mri_surf2surf --s Control01 --hemi lh --sval-tal-xyz white --tval
lh.white.Control01 --tval-xyz --trgsubject
fsaverage5/label/rh.Yeo2011_7NetworksConfidence_N1000.mgz
Reading target surface reg
$SUBJE
Hi Doug,
Yes that works! I'm viewing it on the surface.
LMR
On Tue, Jul 15, 2014 at 6:27 PM, Douglas N Greve
wrote:
> Are you trying to view it in the volume or the surface? When I run
> freeview viewing the surface and load the label using the "Load Label"
> button (not File->LoadLabel), i
