Hi Clark, mri_glmfit should work fine. If you have the ROIs in a volume
format (eg, nifti or mgh) you can run mri_concat on them to create a
stack, then just pass the stack to mri_glmfit with the --y flag (also
add --no-est-fwhm). If you don't have them in a volume format, you can
create a vol
Dear Freesurfer experts,
I've run the following command to pull out mean, stdev etc. for the left
and right NAcc area from a COPE (condition1-condition2) for each of my
participants:
mri_segstats --seg subj.feat/reg/freesurfer/aseg.nii.gz \
--id 26 58 --nonempty --ctab-default \
--i subj.feat/s
