This isn't for an annotation automatically labelled using mris_ca_label; I've
simply manually traced my ROIs then saved out an annotation by assigning labels
from the colour table in tksurfer. At this stage I'd like to get stats on my
manual ROIs.
Does -b only give labels if the automatic parcel
Hi. I was wondering if anybody out there has made other parcellations of
the entire brain besides the standard freesurfer one with 81 named regions?
For instance, did anybody go to the painful trouble of making a 4 lobe
parcellation?
Thanks
Daniel Goldenholz
Hi Alex,
did you run mris_ca_train with -t ? If so, it should embed
the color table in the .gcs file, then get probagated to the .annot, so
you shouldn't have to specify anything to mris_anatomical_stats.
cheers,
Bruce
On Fri, 30
Dec 2005, Fornito, Alexander wrote:
Hi,
I'm trying to run m
Hi,
I'm trying to run mris_anatomical_stats on a custom parcellation, but am having
problems because I don't know what the flag to speficy the appropriate colour
table is. If I run the -b option, I get output but with no labels. If I run -f,
I get a message saying that no colour table is loaded.
