Re: UIMA version 3 or later JCas required [EXTERNAL]

2021-08-19 Thread Benjamin hansen
Ok, downgrading UIMA fixed this... its just a weird error message since it says UIMA v. 3 or higher is required... But this seems to work fine with UIMA v. 2x :) On Tue, Aug 17, 2021 at 10:08 PM Finan, Sean < sean.fi...@childrens.harvard.edu> wrote: > > Without a little more information I cannot

Re: An exception occured while executing the Java class. URI is not hierarchical [EXTERNAL]

2021-08-19 Thread Benjamin hansen
Thanks for the input. So I am trying to use the ClinicalPipelineFactory.getTokenProcessingPipeline which includes the LVG which seems to be having the issue. But you say i can just replace the LVG part with the DependencyParser in that pipeline? Can you elaborate a bit on where I can find the Depen

Re: An exception occured while executing the Java class. URI is not hierarchical [EXTERNAL]

2021-08-19 Thread Benjamin hansen
Btw. the full stacktrace is as follows: 19 Aug 2021 13:11:20 INFO LvgAnnotator - URL for lvg.properties =file:/Users/myuser/.m2/repository/net/sourceforge/ctakesresources/ctakes-resources-lvg2008/4.0.0/ctakes-resources-lvg2008-4.0.0.jar!/org/apache/ctakes/lvg/data/config/lvg.properties 19 Aug

Re: An exception occured while executing the Java class. URI is not hierarchical [EXTERNAL]

2021-08-19 Thread Peter Abramowitsch
RE the Dependency Parser, it is part of the release. Just use the PiperCreator app and look for it in the list of modules. It will tell you it's prerequisites, and therefore where in your Piper file it belongs. addDescription ClearNLPDependencyParserAE - Peter On Thu, Aug 19, 2021 at 2:39 AM Be