Hi Alaa,
Sorry for the late reply, I'll try to get you something a little more useful in
the next few days.
Sean
-Original Message-
From: Alaa al Barari [mailto:alaa.albar...@gmail.com]
Sent: Thursday, December 10, 2015 12:27 PM
To: dev@ctakes.apache.org
Subject: Re: ctakes with
; wrote:
> >
> >> Thank, but what I endup with is
> >> wrong ?
> >> On Dec 10, 2015 4:26 AM, "Finan, Sean"
> >>
> >> wrote:
> >>
> >>> Hi Alaa,
> >>>
> >>> If you downloaded the 2015 .property a
official tool or part of the ctakes release.
Sean
-Original Message-
From: Alaa al Barari [mailto:alaa.albar...@gmail.com]
Sent: Thursday, December 10, 2015 10:38 AM
To: dev@ctakes.apache.org
Subject: Re: ctakes with icd10; 2015 versions available on sourceforge!
Hi Finan,
I am sorr
eady to use.
>>>
>>> Sean
>>>
>>>
>>> -Original Message-
>>> From: Alaa al Barari [mailto:alaa.albar...@gmail.com]
>>> Sent: Wednesday, December 09, 2015 6:33 PM
>>> To: dev@ctakes.apache.org
>>> Sub
works you can then try to use the new dictionaries with cTAKES.
Hope that helps,
Brandon
-Original Message-
From: Alaa al Barari [mailto:alaa.albar...@gmail.com]
Sent: Thursday, December 10, 2015 3:37 AM
To: dev@ctakes.apache.org
Subject: Re: ctakes with icd10; 2015 versions availab
already
>> populated and ready to use.
>>
>> Sean
>>
>>
>> -Original Message-
>> From: Alaa al Barari [mailto:alaa.albar...@gmail.com]
>> Sent: Wednesday, December 09, 2015 6:33 PM
>> To: dev@ctakes.apache.org
>> Subject: Re: ctakes with icd10; 2015
nd ready to use.
>
> Sean
>
>
> -Original Message-
> From: Alaa al Barari [mailto:alaa.albar...@gmail.com]
> Sent: Wednesday, December 09, 2015 6:33 PM
> To: dev@ctakes.apache.org
> Subject: Re: ctakes with icd10; 2015 versions available on sourceforge!
>
> so basically l
09, 2015 6:33 PM
To: dev@ctakes.apache.org
Subject: Re: ctakes with icd10; 2015 versions available on sourceforge!
so basically looks like the path had Desktop as capital thats why it did not
work.
I ended up having rows like this inside ctakesicd2015.scripts :
INSERT INTO CUI_TERMS VALUES
re open discussion/open development.)
>> --Pei
>>
>> On Tue, Dec 8, 2015 at 10:36 PM, Geise, Brandon D.
>> wrote:
>> > I'd be interested in contributing to making the dictionary tool more
>> user friendly with a GUI.
>> >
>> > Thanks,
>>
t;
> > Thanks,
> > Brandon
> >
> > -Original Message-
> > From: Finan, Sean [mailto:sean.fi...@childrens.harvard.edu]
> > Sent: Tuesday, December 08, 2015 6:12 PM
> > To: dev@ctakes.apache.org
> > Subject: RE: ctakes with icd10; 2015 versions availabl
>
> Thanks,
> Brandon
>
> -Original Message-
> From: Finan, Sean [mailto:sean.fi...@childrens.harvard.edu]
> Sent: Tuesday, December 08, 2015 6:12 PM
> To: dev@ctakes.apache.org
> Subject: RE: ctakes with icd10; 2015 versions available on sourceforge!
>
> Hi D
6:12 PM
To: dev@ctakes.apache.org
Subject: RE: ctakes with icd10; 2015 versions available on sourceforge!
Hi Dave,
I'm always happy to see interest in our stuff!
>Step 1
I built the tool to be able to build a dictionary using anything in the umls -
snomed, icd9, hpo, etc. so using the ve
obably to make an easy to use gui and keep a pre-built
version in sandbox. Someday, after the rainbow, maybe I'll get a chance to do
that ...
Sean
-Original Message-
From: David Kincaid [mailto:kincaid.d...@gmail.com]
Sent: Tuesday, December 08, 2015 4:57 PM
To: dev@ctakes.apache.
but I hope that it helps.
Must run,
Sean
-Original Message-
From: Alaa al Barari [mailto:alaa.albar...@gmail.com]
Sent: Tuesday, December 08, 2015 6:49 PM
To: dev@ctakes.apache.org
Subject: Re: ctakes with icd10; 2015 versions available on sourceforge!
Thank you very very much Finan,
I am
;installation package", making a gui ... The
> best option (imo) is probably to make an easy to use gui and keep a
> pre-built version in sandbox. Someday, after the rainbow, maybe I'll get a
> chance to do that ...
>
> Sean
>
>
> -Original Message-----
> Fro
pre-built
version in sandbox. Someday, after the rainbow, maybe I'll get a chance to do
that ...
Sean
-Original Message-
From: David Kincaid [mailto:kincaid.d...@gmail.com]
Sent: Tuesday, December 08, 2015 4:57 PM
To: dev@ctakes.apache.org
Subject: Re: ctakes with icd10; 2015 vers
the instructions aren't clear. They seemed to make sense when I wrote
them at the time.
Hope that helps,
Brandon
_
From: David Kincaid mailto:kincaid.d...@gmail.com>>
Sent: Tuesday, December 8, 2015 4:57 PM
Subject: Re: ctakes with icd10; 2015 versions a
t; https://cwiki.apache.org/confluence/display/CTAKES/cTAKES+3.2+-+Fast+Dictionary+Lookup
> Though I should probably add a few items ...
>
>
> Sean
>
>
> -Original Message-
> From: Geise, Brandon D. [mailto:bdge...@geisinger.edu]
> Sent: Tuesday, December 08, 2015
TAKES/cTAKES+3.2+-+Fast+Dictionary+Lookup
Though I should probably add a few items ...
Sean
-Original Message-
From: Geise, Brandon D. [mailto:bdge...@geisinger.edu]
Sent: Tuesday, December 08, 2015 12:51 PM
To: dev@ctakes.apache.org
Subject: RE: ctakes with icd10
Not to perpetuat
, icd#Code );
>>
>> Sean
>>
>> -Original Message-
>> From: Savova, Guergana [mailto:guergana.sav...@childrens.harvard.edu]
>> Sent: Tuesday, December 08, 2015 12:17 PM
>> To: dev@ctakes.apache.org
>> Subject: RE: ctakes with icd10
>>
y, December 08, 2015 12:47 PM
To: dev@ctakes.apache.org
Subject: Re: ctakes with icd10
This seems like a pretty common request and with such an old version of UMLS
database shipped with cTAKES it's only going to get worse. I've been wanting to
build a dictionary using the latest UML
les to new location and create a copy of
cTakesHsql.xml and update dictionary location
Thanks,
Brandon
-Original Message-
From: David Kincaid [mailto:kincaid.d...@gmail.com]
Sent: Tuesday, December 08, 2015 12:47 PM
To: dev@ctakes.apache.org
Subject: Re: ctakes with icd10
This seems like
> From: Savova, Guergana [mailto:guergana.sav...@childrens.harvard.edu]
> Sent: Tuesday, December 08, 2015 12:17 PM
> To: dev@ctakes.apache.org
> Subject: RE: ctakes with icd10
>
> Hi Alaa,
> You need to create a resource off the terminology/ontology you want to use
> (i
Code( jcas, icd#Code );
Sean
-Original Message-
From: Savova, Guergana [mailto:guergana.sav...@childrens.harvard.edu]
Sent: Tuesday, December 08, 2015 12:17 PM
To: dev@ctakes.apache.org
Subject: RE: ctakes with icd10
Hi Alaa,
You need to create a resource off the terminology/ontology y
Hi Alaa,
You need to create a resource off the terminology/ontology you want to use (in
this case ICD9 or ICD10). Then run that resource with cTAKES for the fast
dictionary lookup. There is cTAKES code and some documentation on how to create
that resource. By default, cTAKES runs with a resource
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