usting my workflow to DTRT.
--
Aaron M. Ucko, KB1CJC (amu at alum.mit.edu, ucko at debian.org)
http://www.mit.edu/~amu/ | http://stuff.mit.edu/cgi/finger/?a...@monk.mit.edu
u...@debian.org (Aaron M. Ucko) writes:
>> The fix itself looks fine, so please feel free to go ahead (with the
>> Closes: removed and possibly with .gitignore restored if appropriate).
>
> Will do, thanks!
Uploaded, final debdiff confirmed not to touch .gitignore. Thanks!
f looks fine, so please feel free to go ahead (with the
> Closes: removed and possibly with .gitignore restored if appropriate).
Will do, thanks!
--
Aaron M. Ucko, KB1CJC (amu at alum.mit.edu, ucko at debian.org)
http://www.mit.edu/~amu/ | http://stuff.mit.edu/cgi/finger/?a...@monk.mit.edu
-6~deb12u1) bookworm; urgency=medium
+
+ * Reupload to bookworm (stable). (Closes: #10nnnnn).
+
+ -- Aaron M. Ucko Wed, 12 Jul 2023 22:20:14 -0400
+
+sra-sdk (3.0.3+dfsg-6) unstable; urgency=high
+
+ * debian/rules: Expand $(DEB_HOST_MULTIARCH) in libngs-java.links.in.
+(Closes: #1039621.)
Paul Gevers writes:
> On 08-07-2021 21:06, Aaron M. Ucko wrote:
>> I should be able to upload around 22:00 UTC. (Also, I take it you're OK
>> with the full version, since you didn't indicate otherwise.) Thanks much!
>
> Yes.
Uploaded. Thanks again!
--
Paul Gevers writes:
> Hi Aaron,
Hi, Paul.
> Assuming the upload happens shortly, please go ahead.
I should be able to upload around 22:00 UTC. (Also, I take it you're OK
with the full version, since you didn't indicate otherwise.) Thanks much!
--
Aaron M. Ucko, KB1CJC (amu
nted options. (In particular, ncbi-blast+'s
+get_species_taxids uses efetch's undocumented -docsum shorthand.)
+(Closes: #990741.)
+
+ -- Aaron M. Ucko Mon, 05 Jul 2021 22:12:10 -0400
+
ncbi-entrez-direct (14.6.20210224+dfsg-3) unstable; urgency=medium
* debian/man/eblast
"Adam D. Barratt" writes:
> Please go ahead.
Thanks! Uploaded.
--
Aaron M. Ucko, KB1CJC (amu at alum.mit.edu, ucko at debian.org)
http://www.mit.edu/~amu/ | http://stuff.mit.edu/cgi/finger/?a...@monk.mit.edu
sse42.
+(Closes: #951280.)
+
+ -- Aaron M. Ucko Sun, 23 Feb 2020 20:11:40 -0500
+
ncbi-blast+ (2.8.1-1) unstable; urgency=medium
* New upstream release.
diff --git a/debian/rules b/debian/rules
index b017193c..15568fa7 100755
--- a/debian/rules
+++ b/debian/rules
@@ -14,7
"Adam D. Barratt" writes:
> Please go ahead. Thanks for the fix.
Uploaded, thanks!
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Aaron M. Ucko, KB1CJC (amu at alum.mit.edu, ucko at debian.org)
http://www.mit.edu/~amu/ | http://stuff.mit.edu/cgi/finger/?a...@monk.mit.edu
sg1-0+deb10u2) buster; urgency=medium
+
+ * debian/ncbi-data.NEWS: Note UniVec removal, which turned out to have a
+bigger impact than anticipated.
+ * debian/tests/run-unit-test: Explicitly point vecscreen at UniVec_Core.
+(See #935424.)
+
+ -- Aaron M. Ucko Sun, 25 Aug 2019 21:15:12
"Adam D. Barratt" writes:
> Please go ahead with the stretch upload.
Uploaded, thanks!
--
Aaron M. Ucko, KB1CJC (amu at alum.mit.edu, ucko at debian.org)
http://www.mit.edu/~amu/ | http://stuff.mit.edu/cgi/finger/?a...@monk.mit.edu
"Adam D. Barratt" writes:
> Please go ahead; thanks.
Uploaded, thanks!
--
Aaron M. Ucko, KB1CJC (amu at alum.mit.edu, ucko at debian.org)
http://www.mit.edu/~amu/ | http://stuff.mit.edu/cgi/finger/?a...@monk.mit.edu
for the debian/patches/debian-changes diff noise, which is an
artifact of my dgit usage style.
--
Aaron M. Ucko, KB1CJC (amu at alum.mit.edu, ucko at debian.org)
http://www.mit.edu/~amu/ | http://stuff.mit.edu/cgi/finger/?a...@monk.mit.edu
Binary files /tmp/user/7286/_0/zDlf7xFapq/ncbi-tools6-6.1
clone 933828 -1
tags 933828 - buster
retitle 933828 ncbi-tools6/6.1.20170106+dfsg1-0+deb9u1
tags -1 - stretch
retitle -1 ncbi-tools6/6.1.20170106+dfsg1-0+deb10u1
thanks
"Aaron M. Ucko" writes:
> Got it, thanks; cloning and tuning accordingly.
This time for real. (Long week.)
&g
On a somewhat related
note, should I cite the tracking bugs in my changelogs?
--
Aaron M. Ucko, KB1CJC (amu at alum.mit.edu, ucko at debian.org)
http://www.mit.edu/~amu/ | http://stuff.mit.edu/cgi/finger/?a...@monk.mit.edu
"Aaron M. Ucko" writes:
> some data files turned out to contain non-free portions
Oops, looks like I'll need to update the autopkgtest in buster (and
unstable) to account for removing these files; I should be able to take
care of it over the weekend.
Sorry for not cat
N_SHLIB, with +dfsg1 stripped off.
+ * debian/watch: Reflect usage of +dfsg1.
+ * make/makeshlb.unx: NCBI_VERSION -> NCBI_VERSION_SHLIB.
+ * Temporarily revert ncbi-cn3d splitout to expedite the above fixes.
+
+ -- Aaron M. Ucko Sat, 03 Aug 2019 22:12:51 -0400
+
ncbi-tools6 (6.1.20170106-2) u
PORTED_CONFIGURATIONS
NONE)
+SET_TARGET_PROPERTIES(fltk_images_SHARED PROPERTIES
+ IMPORTED_LINK_INTERFACE_LIBRARIES_NONE ""
+ IMPORTED_LOCATION_NONE "@libdir@/libfltk_images.so.1.3"
+ IMPORTED_SONAME_NONE "libfltk_images.so.0"
+ )
+
+# Import target "fltk
based
+on a suggestion from Gianfranco Costamagna .
+(Closes: #855040.)
+
+ -- Aaron M. Ucko Mon, 13 Feb 2017 22:26:35 -0500
+
fltk1.3 (1.3.4-2) unstable; urgency=medium
* debian/fix-fltk-targets-noconfig: Update for current CMake output
diff --git a/debian/fix-fltk-targets-noconfig b/debia
. Please proceed to binNMU it.
Thanks!
--
Aaron M. Ucko, KB1CJC (amu at alum.mit.edu, ucko at debian.org)
http://www.mit.edu/~amu/ | http://stuff.mit.edu/cgi/finger/?a...@monk.mit.edu
Package: release.debian.org
Severity: normal
User: release.debian@packages.debian.org
The fltk1.3 1.3.2-3 build on s390 appears to have hit a glitch; could
you please requeue it so that it will be able to migrate to testing?
Thanks!
gb fltk1.3_1.3.2-3 . s390
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ourceful upload,
which makes this a moot point.
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--
To UNSUBSCRIBE, email to debian-release-requ...@lists.debian.org
with a subject of "unsubscribe
olicies for C++ and Fortran ABI
transitions.
> The NBS cleanup won't happen before njplot is rebuilt anyway, so I don't
> care so much about that.
OK, thanks. In that case, the only concern is a de facto conflict with
ncbi-tools-x11, since libvibrant6 and libvibrant6a aren't
or not mentioning that earlier.
BTW, that's also why I didn't need to include a version in the dep-wait
request (which won't be necessary for sparc anymore, FTR).
Thanks!
--
Aaron M. Ucko, KB1CJC (amu at alum.mit.edu, ucko at debian.org)
http://www.mit.edu/~amu/ | http://stuff.
eally pick up
libvibrant6; see #710205.'
dw njplot_2.4-2 . armhf mips s390 sparc . -m 'libvibrant6'
Thanks!
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Aaron M. Ucko, KB1CJC (amu at alum.mit.edu, ucko at debian.org)
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--
To UNSUBSCRIBE, ema
executable
+position-independent and subject to loading at randomized addresses.)
+(Closes: #695262.)
+
+ -- Aaron M. Ucko Thu, 06 Dec 2012 21:53:01 -0500
+
bsdgames-nonfree (2.17-4) unstable; urgency=low
* config.params: defer to debian/rules for build flags (which weren't
on
Package: release.debian.org
Severity: normal
User: release.debian@packages.debian.org
Usertags: binnmu
nmu xemacs21_21.4.22-4 . amd64 . -m "rebuild against Berkeley DB 5.1.x"
xemacs21's binary packages accidentally wound up depending on the
obsolete libdb4.8 package on amd64; please rebuild t
c/man/cleanasn.1: fix SEE ALSO formatting.
* debian/control:
- bump dpkg-dev build-dep to >= 1.15.7 for dpkg-buildflags.
- Standards-Version: 3.9.1 (already compliant).
- note switch to git-mediated Debian-Med team maintenance.
-- Aaron M. Ucko Wed, 13 Oct 2010 20:23:37 -0400
a
or asndisc.
* doc/man/cleanasn.1: fix SEE ALSO formatting.
* debian/control:
- bump dpkg-dev build-dep to >= 1.15.7 for dpkg-buildflags.
- Standards-Version: 3.9.1 (already compliant).
- note switch to git-mediated Debian-Med team maintenance.
Thanks again for considering my request.
nasn.1: fix SEE ALSO formatting.
* debian/control:
- bump dpkg-dev build-dep to >= 1.15.7 for dpkg-buildflags.
- Standards-Version: 3.9.1 (already compliant).
- note switch to git-mediated Debian-Med team maintenance.
-- Aaron M. Ucko Fri, 03 Sep 2010 17:43:17 -0400
In parti
x27;ll merge your changes later.
Uploaded; thanks for the go-ahead!
--
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with a subject of
a...@alum.mit.edu (Aaron M. Ucko) writes:
> Thanks for confirming my assessment. Having heard nothing from
> gnade's maintainer so far (I'm just the bug's submitter), I've gone
> ahead and prepared a regular NMU (diff attached), which I tentatively
> inten
d), which I tentatively
intend to upload tomorrow evening.
--
Aaron M. Ucko, KB1CJC (amu at alum.mit.edu, ucko at debian.org)
http://www.mit.edu/~amu/ | http://stuff.mit.edu/cgi/finger/?...@monk.mit.edu
diff -u gnade-1.6.2/debian/changelog gnade-1.6.2/debian/changelog
--- gnade-1.6.2/debian/ch
Andreas Barth writes:
> The only exception to this are uploads that are necessary to get this
> transition done, and are acked by me.
AFAICT, #542325 calls for another (sourceful) upload of gnade, which
has proven binNMU-unsafe.
--
Aaron M. Ucko, KB1CJC (amu at alum.mit.edu, u
igrate in a couple more
days assuming that priorities still count for anything. (Otherwise,
it'll be more like a week; regardless, the only obstacles are the
freeze and the general holding period.)
Could you please proceed to unblock it?
Thanks again, and have a happy new year.
--
Aaron M. U
liread.c (revision 363)
+++ api/aliread.c (working copy)
@@ -314,8 +314,7 @@
seqLinePtr = (SeqLineInfoPtr) rowPtr->data.ptrvalue;
if (seqLinePtr->junk != NULL)
- sprintf(seqLinePtr->sequence,"%s%s",seqLinePtr->sequence,
- seqLinePtr->jun
p on earlier) should
indeed suffice. Thanks for taking care of it, not to mention the
other two packages!
--
Aaron M. Ucko, KB1CJC (amu at alum.mit.edu, ucko at debian.org)
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--
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ffmpeg and libsox-fmt-mp3 uninstallable.
Could you please (re)schedule the relevant builds?
Thanks!
--
Aaron M. Ucko, KB1CJC (amu at alum.mit.edu, ucko at debian.org)
Finger [EMAIL PROTECTED] (NOT a valid e-mail address) for more info.
--
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with a subject
e libpoppler3 transition proceeded to reveal a handful of
misspecified dependencies (which I suppose I ought to report, as
nobody else has yet AFAICT).
--
Aaron M. Ucko, KB1CJC (amu at alum.mit.edu, ucko at debian.org)
http://www.mit.edu/~amu/ | http://stuff.mit.edu/cgi/finger/[EMAIL PROTECTED]
-dev 3.0.x, albeit a broken version thereof.
* AFAICT, the bug in question only affected amd64, as other
potentially relevant architectures (including i386) already make
proper use of the relevant predefined macros.
Thanks!
--
Aaron M. Ucko, KB1CJC (amu at alum.mit.edu, ucko at debian.org)
Fin
ral actually supports that case
AFAICT. :-/ As such, I'll leave the (binNMU-friendly) packaging as is.
BTW, do you have an ETA for the transition?
--
Aaron M. Ucko, KB1CJC (amu at alum.mit.edu, ucko at debian.org)
http://www.mit.edu/~amu/ | http://stuff.mit.edu/cgi/finger/[EMAIL PROTECTED]
-
bother with this one; BitPim actually builds its
extensions only for whichever Python version is currently default, as
they're private and the app needs wxPython anyway.
--
Aaron M. Ucko, KB1CJC (amu at alum.mit.edu, ucko at debian.org)
http://www.mit.edu/~amu/ | http://stuff.mit.edu/cgi/
Package: gnome-applets
Version: 2.18.0-4
Severity: grave
Justification: renders package unusable (uninstallable)
At least on amd64, gnome-applets depends on versions of libglib2.0-0
and libgtk2.0-0 that are only available from experimental; I expect a
binary-only NMU should resolve the matter.
Co
aders, unless I somehow screwed them up).
Thanks!
--
Aaron M. Ucko, KB1CJC (amu at alum.mit.edu, ucko at debian.org)
Finger [EMAIL PROTECTED] (NOT a valid e-mail address) for more info.
diff -u fltk1.1-1.1.7/debian/control fltk1.1-1.1.7/debian/control
--- fltk1.1-1.1.7/debian/control
+++ fltk1.1-
hich would seem to indicate that Michael forgot pbuilder's
--binary-arch flag and moreover has a very narrow definition of "other
arches".
--
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--
To
s have the same problem, differing from
the original build (which, incidentally, also ran on the same
autobuilder [nautilus] -- the maintainer uploaded i386 binaries) only
in lacking python2.3 support. :-/
Assuming I can get correct packages out of pbuilder, would it be
appropriate for me to upload the
sequently complained that the Build-Depends-Indep (namely,
imagemagick) was missing even though it had chosen not to install it
in the first place.
--
Aaron M. Ucko, KB1CJC (amu at alum.mit.edu, ucko at debian.org)
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