[med-svn] [mia] annotated tag debian/2.4.4-1_exp1 created (now c5f87c0)

2017-03-21 Thread Gert Wollny
This is an automated email from the git hooks/post-receive script. gewo pushed a change to annotated tag debian/2.4.4-1_exp1 in repository mia. at c5f87c0 (tag) tagging 88697366b39d3ac18183203212712117a65f09fd (commit) replaces debian/2.4.3-5 tagged by Gert Wollny on

[med-svn] [mia] annotated tag upstream/2.4.4 created (now cb643f5)

2017-03-21 Thread Gert Wollny
This is an automated email from the git hooks/post-receive script. gewo pushed a change to annotated tag upstream/2.4.4 in repository mia. at cb643f5 (tag) tagging 277c0d9d1b30f7a84dcb5aef9919db67772a9e38 (commit) replaces upstream/2.4.3 tagged by Gert Wollny on Tue M

[med-svn] [mia] branch upstream updated (1bb7eb8 -> 277c0d9)

2017-03-21 Thread Gert Wollny
This is an automated email from the git hooks/post-receive script. gewo pushed a change to branch upstream in repository mia. from 1bb7eb8 Imported Upstream version 2.4.3 new 277c0d9 New upstream version 2.4.4 The 1 revisions listed above as "new" are entirely new to this repo

[med-svn] [mia] 02/03: Merge tag 'upstream/2.4.4'

2017-03-21 Thread Gert Wollny
This is an automated email from the git hooks/post-receive script. gewo pushed a commit to branch master in repository mia. commit e75a21a3e0a977933204106fb0c51340672f81d5 Merge: 0ec520f 277c0d9 Author: Gert Wollny Date: Tue Mar 21 23:41:13 2017 + Merge tag 'upstream/2.4.4' U

[med-svn] [mia] 03/03: Prepare new upstream version for experimental

2017-03-21 Thread Gert Wollny
This is an automated email from the git hooks/post-receive script. gewo pushed a commit to branch master in repository mia. commit 88697366b39d3ac18183203212712117a65f09fd Author: Gert Wollny Date: Tue Mar 21 23:42:09 2017 + Prepare new upstream version for experimental --- debian/ch

[med-svn] [mia] 01/01: pristine-tar data for mia_2.4.4.orig.tar.xz

2017-03-21 Thread Gert Wollny
This is an automated email from the git hooks/post-receive script. gewo pushed a commit to branch pristine-tar in repository mia. commit b57d83e0ce7243f3c9d1a91707a83472b719b7e7 Author: Gert Wollny Date: Tue Mar 21 23:41:13 2017 + pristine-tar data for mia_2.4.4.orig.tar.xz --- mia_2

[med-svn] [mia] branch pristine-tar updated (309d7fb -> b57d83e)

2017-03-21 Thread Gert Wollny
This is an automated email from the git hooks/post-receive script. gewo pushed a change to branch pristine-tar in repository mia. from 309d7fb pristine-tar data for mia_2.4.3.orig.tar.xz new b57d83e pristine-tar data for mia_2.4.4.orig.tar.xz The 1 revisions listed above as "n

[med-svn] [mia] branch master updated (0ec520f -> 8869736)

2017-03-21 Thread Gert Wollny
This is an automated email from the git hooks/post-receive script. gewo pushed a change to branch master in repository mia. from 0ec520f Prepare new upload new 277c0d9 New upstream version 2.4.4 new e75a21a Merge tag 'upstream/2.4.4' new 8869736 Prepare new

[med-svn] samtools branch debian/unstable updated (7e76eb3 -> 32563cc)

2017-03-21 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to branch debian/unstable in repository samtools. from 7e76eb3 Bump versioned Depends: libhts-dev (>= 1.4), upload to experimental new 32563cc Rebuild against properly named libhts which h

[med-svn] samtools 01/01: Rebuild against properly named libhts which had a soname change

2017-03-21 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch debian/unstable in repository samtools. commit 32563cce4ae4e8efbe4270f60d6340c83cf835ce Author: Andreas Tille Date: Tue Mar 21 21:43:13 2017 +0100 Rebuild against properly named libhts which

[med-svn] [htslib] tag debian/1.4-1_bpo8+1 created (now a14f921)

2017-03-21 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to tag debian/1.4-1_bpo8+1 in repository htslib. at a14f921 (commit) No new revisions were added by this update. -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-me

[med-svn] [htslib] branch debian/jessie-backports updated (9338f9a -> a14f921)

2017-03-21 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to branch debian/jessie-backports in repository htslib. from 9338f9a Inofficial rebuild for jessie-backports (we can not upload to backports since testing migration is interupted in freeze) ad

[med-svn] [htslib] 01/01: Merge branch 'debian/unstable' into debian/jessie-backports

2017-03-21 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch debian/jessie-backports in repository htslib. commit a14f921492fc006cb08c4f296bf814131e089e3c Merge: 9338f9a d6ae67d Author: Andreas Tille Date: Tue Mar 21 21:55:38 2017 +0100 Merge branch '

[med-svn] [htslib] tag debian/1.4-1_bpo8+1 deleted (was 9338f9a)

2017-03-21 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to tag debian/1.4-1_bpo8+1 in repository htslib. *** WARNING: tag debian/1.4-1_bpo8+1 was deleted! *** was 9338f9a Inofficial rebuild for jessie-backports (we can not upload to backports since tes

[med-svn] [htslib] branch debian/unstable updated (46d5eee -> d6ae67d)

2017-03-21 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to branch debian/unstable in repository htslib. from 46d5eee Drop autoconf from Build-Depends, add libbz2-dev and liblzma-dev to Build-Depends new 28af9f8 Remove binary files from test res

[med-svn] [htslib] 02/03: Remove symbols file since I'm too lazy to maintain these - volunteers welcome for a final upload to instable

2017-03-21 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch debian/unstable in repository htslib. commit f711b01663ee28387dd1c704f4cccd9854f03764 Author: Andreas Tille Date: Tue Mar 21 21:22:09 2017 +0100 Remove symbols file since I'm too lazy to mai

[med-svn] [htslib] tag debian/1.4-1 created (now d6ae67d)

2017-03-21 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to tag debian/1.4-1 in repository htslib. at d6ae67d (commit) No new revisions were added by this update. -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/htsli

[med-svn] [htslib] 03/03: hange library name to match soname

2017-03-21 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch debian/unstable in repository htslib. commit d6ae67daffa4819cfc0a913d6a6fbab338f82f8a Author: Andreas Tille Date: Tue Mar 21 21:30:16 2017 +0100 hange library name to match soname --- debia

[med-svn] [htslib] 01/03: Remove binary files from test results

2017-03-21 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch debian/unstable in repository htslib. commit 28af9f8c0129302a9f7843d341da3ace2afa7662 Author: Andreas Tille Date: Tue Mar 21 21:21:20 2017 +0100 Remove binary files from test results --- de

[med-svn] [htslib] tag debian/1.4-1 deleted (was 46d5eee)

2017-03-21 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to tag debian/1.4-1 in repository htslib. *** WARNING: tag debian/1.4-1 was deleted! *** was 46d5eee Drop autoconf from Build-Depends, add libbz2-dev and liblzma-dev to Build-Depends The revision

[med-svn] [mptp] branch master updated (b8c941f -> 89ebbf5)

2017-03-21 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to branch master in repository mptp. from b8c941f Upload to new new 89ebbf5 Fixed copyright The 1 revisions listed above as "new" are entirely new to this repository and will be described

[med-svn] [mptp] 01/01: Fixed copyright

2017-03-21 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository mptp. commit 89ebbf5e056f20bc95d6d9bb07ac2642434b6a37 Author: Andreas Tille Date: Tue Mar 21 20:30:31 2017 +0100 Fixed copyright --- debian/copyright | 4 +++- 1 file c

[med-svn] [htslib] branch debian/jessie-backports updated (83fbdd9 -> 9338f9a)

2017-03-21 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to branch debian/jessie-backports in repository htslib. from 83fbdd9 htslib (1.3.1-1~bpo8+1) jessie-backports; urgency=medium adds 2064848 Merge version number bump and NEWS file from master

[med-svn] [htslib] 03/03: Inofficial rebuild for jessie-backports (we can not upload to backports since testing migration is interupted in freeze)

2017-03-21 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch debian/jessie-backports in repository htslib. commit 9338f9a2efeabf4b83dd2ba7856d6f9a36afa859 Author: Andreas Tille Date: Tue Mar 21 19:33:11 2017 +0100 Inofficial rebuild for jessie-backpor

[med-svn] [htslib] 01/03: Merge branch 'master' into debian/jessie-backports

2017-03-21 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch debian/jessie-backports in repository htslib. commit adc8ffc6ddb7d5e3b240570f92ce474583378ed5 Merge: 83fbdd9 879855b Author: Andreas Tille Date: Tue Mar 21 19:30:10 2017 +0100 Merge branch '

[med-svn] [htslib] 02/03: Merge branch 'debian/unstable' into debian/jessie-backports

2017-03-21 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch debian/jessie-backports in repository htslib. commit 0fe770753513e5403e72353fca772dff428b4d6d Merge: adc8ffc 46d5eee Author: Andreas Tille Date: Tue Mar 21 19:32:50 2017 +0100 Merge branch '

[med-svn] [htslib] tag debian/1.4-1_bpo8+1 created (now 9338f9a)

2017-03-21 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to tag debian/1.4-1_bpo8+1 in repository htslib. at 9338f9a (commit) No new revisions were added by this update. -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-me

[med-svn] samtools branch debian/unstable updated (0bc88ca -> 7e76eb3)

2017-03-21 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to branch debian/unstable in repository samtools. from 0bc88ca Remove wrong debian-changes patch new 7d3f3a8 Merge version number bump and NEWS file from master new 9627ffb HTSlib

[med-svn] samtools annotated tag 1.4 created (now d9811be)

2017-03-21 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to annotated tag 1.4 in repository samtools. at d9811be (tag) tagging 0a859b10a2343f4146fc3c0f71044d182461ad46 (commit) replaces 1.3.1 tagged by jenniferliddle on Mon Mar 13 14:49

[med-svn] [htslib] branch debian/unstable updated (54feaaa -> 46d5eee)

2017-03-21 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to branch debian/unstable in repository htslib. from 54feaaa Upload to experimental adds d8c1ca3 Removed use of CRAM "CORE" block while encoding. adds 543f030 Add {errmod,kprobaln,b

[med-svn] [htslib] tag debian/1.4-1 created (now 46d5eee)

2017-03-21 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to tag debian/1.4-1 in repository htslib. at 46d5eee (commit) No new revisions were added by this update. -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/htsli

[med-svn] [htslib] annotated tag 1.4 created (now 8f87475)

2017-03-21 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to annotated tag 1.4 in repository htslib. at 8f87475 (tag) tagging d2d9c76ade2df2b63b9cf79ae8decda1dfadc042 (commit) replaces 1.3.2 tagged by jenniferliddle on Mon Mar 13 14:49:3

[med-svn] [subread] branch upstream updated (e3249b5 -> 5ca905c)

2017-03-21 Thread Alex Mestiashvili
This is an automated email from the git hooks/post-receive script. malex-guest pushed a change to branch upstream in repository subread. from e3249b5 Imported Upstream version 1.5.1+dfsg new 5ca905c New upstream version 1.5.2+dfsg The 1 revisions listed above as "new" are enti

[med-svn] [subread] 05/05: Update changelog, upload to unstable

2017-03-21 Thread Alex Mestiashvili
This is an automated email from the git hooks/post-receive script. malex-guest pushed a commit to branch master in repository subread. commit 375b90033e4806f6d09920f4adc55e1d6857bee3 Author: Alexandre Mestiashvili Date: Tue Mar 21 16:20:02 2017 +0100 Update changelog, upload to unstable

[med-svn] [subread] branch pristine-tar updated (7118e05 -> 9d086d2)

2017-03-21 Thread Alex Mestiashvili
This is an automated email from the git hooks/post-receive script. malex-guest pushed a change to branch pristine-tar in repository subread. from 7118e05 pristine-tar data for subread_1.5.1+dfsg.orig.tar.xz new 9d086d2 pristine-tar data for subread_1.5.2+dfsg.orig.tar.xz The 1

[med-svn] [subread] 03/05: Refresh and update patches

2017-03-21 Thread Alex Mestiashvili
This is an automated email from the git hooks/post-receive script. malex-guest pushed a commit to branch master in repository subread. commit ee4a168a4cbe1cc1d77ca25d8604bf1252dfbc4b Author: Alexandre Mestiashvili Date: Tue Mar 21 15:42:12 2017 +0100 Refresh and update patches --- debian

[med-svn] [subread] annotated tag upstream/1.5.2+dfsg created (now 3eee0cb)

2017-03-21 Thread Alex Mestiashvili
This is an automated email from the git hooks/post-receive script. malex-guest pushed a change to annotated tag upstream/1.5.2+dfsg in repository subread. at 3eee0cb (tag) tagging 5ca905c2dc7b6335c301c4c0d59dc336fc757a4b (commit) replaces upstream/1.5.1+dfsg tagged by Alexandr

[med-svn] [subread] 02/05: Merge tag 'upstream/1.5.2+dfsg'

2017-03-21 Thread Alex Mestiashvili
This is an automated email from the git hooks/post-receive script. malex-guest pushed a commit to branch master in repository subread. commit 40cd25ce3bc777c81183d2dfd42669360768c99d Merge: b750d4a 5ca905c Author: Alexandre Mestiashvili Date: Tue Mar 21 09:36:16 2017 +0100 Merge tag 'upst

[med-svn] [subread] 01/01: pristine-tar data for subread_1.5.2+dfsg.orig.tar.xz

2017-03-21 Thread Alex Mestiashvili
This is an automated email from the git hooks/post-receive script. malex-guest pushed a commit to branch pristine-tar in repository subread. commit 9d086d2c3d05864d88ad0e80a7adda0169503afc Author: Alexandre Mestiashvili Date: Tue Mar 21 09:36:16 2017 +0100 pristine-tar data for subread_1.

[med-svn] [subread] branch master updated (b750d4a -> 375b900)

2017-03-21 Thread Alex Mestiashvili
This is an automated email from the git hooks/post-receive script. malex-guest pushed a change to branch master in repository subread. from b750d4a Upload to unstable new 5ca905c New upstream version 1.5.2+dfsg new 40cd25c Merge tag 'upstream/1.5.2+dfsg' new e

[med-svn] [subread] 04/05: Add d/patches/typo.patch fixing a typo in featureCounts

2017-03-21 Thread Alex Mestiashvili
This is an automated email from the git hooks/post-receive script. malex-guest pushed a commit to branch master in repository subread. commit e9ae5f4a9694b7d76e27417023ec808352f87f64 Author: Alexandre Mestiashvili Date: Tue Mar 21 16:16:08 2017 +0100 Add d/patches/typo.patch fixing a typo

[med-svn] [Debian Wiki] Update of "DebianMed/SoftwareLiberation" by AndreasTille

2017-03-21 Thread Debian Wiki
Dear Wiki user, You have subscribed to a wiki page or wiki category on "Debian Wiki" for change notification. The "DebianMed/SoftwareLiberation" page has been changed by AndreasTille: https://wiki.debian.org/DebianMed/SoftwareLiberation?action=diff&rev1=33&rev2=34 Comment: paml now in Debian ma

[med-svn] r23717 - trunk/packages/prank/trunk

2017-03-21 Thread Andreas Tille
Author: tille Date: 2017-03-21 08:00:21 + (Tue, 21 Mar 2017) New Revision: 23717 Added: trunk/packages/prank/trunk/README.status Log: Document move to Git Added: trunk/packages/prank/trunk/README.status === --- trunk/packages

[med-svn] [prank] annotated tag upstream/0.0.150803 created (now f2e241e)

2017-03-21 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to annotated tag upstream/0.0.150803 in repository prank. at f2e241e (tag) tagging 19f9dff9956805929a7919fe90acf5e3ced46a53 (commit) tagged by Andreas Tille on Tue Mar 21 08:56:02 20

[med-svn] [prank] 01/01: pristine-tar data for prank_0.0.150803.orig.tar.gz

2017-03-21 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch pristine-tar in repository prank. commit efd6169d423577a9c009057f539c3d83dd8bae8d Author: Andreas Tille Date: Tue Mar 21 08:56:02 2017 +0100 pristine-tar data for prank_0.0.150803.orig.tar.g

[med-svn] r23716 - in trunk/packages/prank: . trunk

2017-03-21 Thread Andreas Tille
Author: tille Date: 2017-03-21 07:59:36 + (Tue, 21 Mar 2017) New Revision: 23716 Removed: trunk/packages/prank/tags/ trunk/packages/prank/trunk/debian/ Log: Moved packaging to Git ___ debian-med-commit mailing list debian-med-commit@lists.al

[med-svn] [prank] branch upstream created (now 19f9dff)

2017-03-21 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to branch upstream in repository prank. at 19f9dff New upstream version 0.0.150803 No new revisions were added by this update. -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.or

[med-svn] [prank] tag debian/0.0.150803-2 created (now b442e64)

2017-03-21 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to tag debian/0.0.150803-2 in repository prank. at b442e64 (commit) No new revisions were added by this update. -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med

[med-svn] [prank] branch pristine-tar created (now efd6169)

2017-03-21 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to branch pristine-tar in repository prank. at efd6169 pristine-tar data for prank_0.0.150803.orig.tar.gz This branch includes the following new commits: new efd6169 pristine-tar data f

[med-svn] [prank] branch master created (now 7e45618)

2017-03-21 Thread Andreas Tille
This is an automated email from the git hooks/post-receive script. tille pushed a change to branch master in repository prank. at 7e45618 Move packaging from SVN to Git This branch includes the following new commits: new 7f98bae Creating trunk directory new f5da114