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The "DebianMed/SoftwareLiberation" page has been changed by AndreasTille: https://wiki.debian.org/DebianMed/SoftwareLiberation?action=diff&rev1=33&rev2=34 Comment: paml now in Debian main ||[[http://www.hsph.harvard.edu/faculty/alkes-price/software/|eigensoft]]||[[https://lists.debian.org/debian-med/2016/05/msg00135.html|Debian Med list]]||[[https://lists.debian.org/debian-med/2016/07/msg00132.html|Alkes Price]]||2016-07-18|| ||[[http://www.bcgsc.ca/platform/bioinfo/software/abyss|ABySS]]||[[https://lists.debian.org/debian-med/2016/09/msg00036.html|Debian Med list]]||License changed in tarball after upstream authors agreed||2016-10-31|| ||[[http://ab.inf.uni-tuebingen.de/data/software/malt/download/welcome.html|MALT]]||[[https://lists.debian.org/debian-med/2016/08/msg00020.html|Debian Med list]]||[[https://lists.debian.org/debian-med/2016/10/msg00027.html|Repository is open]]||2016-10-11|| + ||[[http://abacus.gene.ucl.ac.uk/software/paml.html|paml]] ||[[https://groups.google.com/forum/#!topic/pamlsoftware/NFu_lNBoAEA|User forum]]||GPL||2017-03-21|| == Discussion in progress == ||'''Software''' ||'''Debian Med contact''' ||'''Status upstream''' || '''Date''' || @@ -25, +26 @@ ||[[https://www-gene.cimr.cam.ac.uk/MSgenetics/GAMES/MSSS/|mssstest]]||[[https://lists.debian.org/debian-med/2016/01/msg00055.html|Debian Med list]]||[[https://lists.debian.org/debian-med/2016/01/msg00084.html|Refused]]||2016-01-15|| ||[[http://bonsai.ims.u-tokyo.ac.jp/~mdehoon/software/cluster/|cluster3]] ||[[https://lists.debian.org/debian-med/2016/01/msg00194.html|Debian Med list]] ||[[https://lists.debian.org/debian-med/2016/02/msg00000.html|Michiel de Hoon]] || 2016-02-01|| ||[[http://sift.jcvi.org/|blimps and sift]] ||[[https://lists.debian.org/debian-med/2016/01/msg00056.html|Debian Med list]] ||[[https://lists.debian.org/debian-med/2016/01/msg00085.html|Pauline Ng]]: Dual license GPL possible || 2016-01-15 || - ||[[http://abacus.gene.ucl.ac.uk/software/paml.html|paml]] ||[[https://groups.google.com/forum/#!topic/pamlsoftware/NFu_lNBoAEA|User forum]]||Ziheng Yang: "assume GPL" - not sufficient for ftpmaster||2016-04-30|| ||[[http://cmpg.unibe.ch/software/fastsimcoal2/|fastsimcoal2]] ||[[https://groups.google.com/forum/#!topic/fastsimcoal/2MrVmpkhuPw|User forum]]||Laurent Excoffier: "No source code" without arguments||2016-06-23|| ||[[http://tandem.bu.edu/trf/trf.html|trf]] ||[[https://lists.debian.org/debian-med/2016/04/msg00084.html|Debian Med list]] ||[[https://lists.debian.org/debian-med/2016/06/msg00093.html|Yozen Hernandez]] agrees but can't decide || 2016-06-19 || ||[[http://www.bioinf.uni-leipzig.de/Software/segemehl/|segemehl]]||[[https://lists.debian.org/debian-med/2016/04/msg00067.html|Debian Med list]] ||No answer yet||2016-06-20|| _______________________________________________ debian-med-commit mailing list debian-med-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
