Hi !
On 11/05/2012 03:13 AM, Andreas Tille wrote:
Hi Sébastien,
On Sun, Nov 04, 2012 at 10:46:23AM -0500, Sébastien Boisvert wrote:
The binary delta is between the original tarball and the collection of Git
objects corresponding to its content.
Oh I understand now.
pristine-tar/x.y.z-R is
Hi Andreas,
On 11/06/2012 02:18 AM, Andreas Tille wrote:
Hi Sébastien,
On Mon, Nov 05, 2012 at 06:59:27PM -0500, Sébastien Boisvert wrote:
I want the ray-extra because ray contains the executable Ray whereas
ray-extra has some R and python scripts which are not used in most Ray
workflows
Hi Andreas !
The github URL provided by Michael Crusoe
is not the git repository.
The actual git repository is
git://github.com/mr-c/bamtools.git
On 11/07/2012 02:59 AM, Andreas Tille wrote:
Hi Michael,
thanks for your effort to prepare a bamtools Debian package and also
notifying the D
your time.
On 11/06/2012 10:09 AM, Andreas Tille wrote:
On Tue, Nov 06, 2012 at 09:17:59AM -0500, Sébastien Boisvert wrote:
I guess now you need to fire up
lintian -i ray_2.1.0-1_amd64.changes
I don't get anything when I run this command. I am on Squeeze.
For development I'd (
I did not know aboutsqueeze-backports though.
Thanks !
Sébastien
On 11/13/2012 09:18 PM, Charles Plessy wrote:
Le Tue, Nov 13, 2012 at 08:24:46PM -0500, Sébastien Boisvert a écrit :
I had to install wheezy because
there were broken dependencies when I tried to install
lintian unstable/sid
On 11/14/2012 02:38 AM, Andreas Tille wrote:
Hi Sébastien,
On Tue, Nov 13, 2012 at 09:51:04PM -0500, Sébastien Boisvert wrote:
My host operating system is not Debian, but Fedora 17.
Are you aware that there is also a FedoraMedical SIG[1]? I'm subscribed
to their list but it is quite s
I pulled your changes and reviewed them.
$ git diff --stat 4a96829165a657ad6e471719ac879f51b6a0ccae..HEAD
debian/changelog | 12 +++-
debian/control | 15 +--
debian/upstream | 12
debian/watch | 2 +-
This is nice -- you added our publication.
I added
Hi,
I have read the format documentation and pushed my changes on
git+ssh://git.debian.org/git/debian-med/ray.git
Thanks !
On 01/22/2013 11:47 AM, Andreas Tille wrote:
Hi Sébastien,
On Tue, Jan 22, 2013 at 11:17:58AM -0500, Sébastien Boisvert wrote:
I pulled your changes and reviewed
On 2014-01-28 11:02, Andreas Tille wrote:
Hi Sébastien,
you initially packaged ray which now is available in a new version[1].
Would you mind upgrading the packaging or simply throw an ENOTIME to
let
others step in?
Kind regards and thanks for your initial work on this
Hi Andreas,
I can d
On 2014-01-28 11:02, Andreas Tille wrote:
Hi Sébastien,
Hey Andreas,
you initially packaged ray which now is available in a new version[1].
I know, I am the maintainer ;-).
Would you mind upgrading the packaging or simply throw an ENOTIME to
let
others step in?
Following the documen
On 2014-02-04 04:29, Andreas Tille wrote:
Hi Sébastien,
Hi Andreas,
On Mon, Feb 03, 2014 at 01:23:09PM -0600, Sébastien Boisvert wrote:
>you initially packaged ray which now is available in a new version[1].
I know, I am the maintainer ;-).
:-)
>Would you mind upgrading the pac
-assembler
Maintainer: Sébastien Boisvert
Section: misc
Priority: optional
Standards-Version: 3.9.2
Build-Depends: debhelper (>= 8), libopenmpi-dev,
libz-dev, libbz2-dev
Package: ray-assembler
Architecture: any
Depends: ${shlibs:Depends}, ${misc:Depends}, openmpi-bin,
libz, libbz2
Descript
an also
generate the requisite ".dsc" file to initiate an upload to Launchpad.
If you want me to make an initial package for you I'm happy to do that,
or if you want to have a go yourself feel free to fire any questions my
way. It's probably best to take further discussion of packagi
pload to Launchpad.
If you want me to make an initial package for you I'm happy to do that,
or if you want to have a go yourself feel free to fire any questions my
way. It's probably best to take further discussion of packaging details
off the CloudBioLinux mailing list.
Cheers,
TIM
thanks for your work and for your interest into Debian Med.
On Fri, Nov 02, 2012 at 12:08:23AM -0400, Sébastien Boisvert wrote:
[I posted this already, but before confirming my subscription]
(Remark: you do not necessarily need to subscribe the list to be
able to post - but if you are interested in
Thanks !
This is exactly what I was looking for.
On 11/02/2012 10:09 AM, Olivier Sallou wrote:
Le 11/2/12 2:58 PM, Sébastien Boisvert a écrit :
Hi Andreas,
I have a Alioth account (sboisvert-guest).
I have read the policy and I will use
git://git.debian.org/git/debian-med/ray.git
ce code or does that break something
else?
Cheers,
TIM
On Fri, 2012-11-02 at 03:55 +, Sébastien Boisvert wrote:
Hello Tim,
Thank you for your wise guidance regarding Debian package preparation.
I successfully created a Debian package for Ray 2.1.0.
You will find packages here in a git r
/lintian/checks/scripts (package lintian)
Using /usr/bin/env Rscript also throws unusual-interpreter.
See below for my specific answers.
On 11/02/2012 01:58 PM, Andreas Tille wrote:
Hi,
On Fri, Nov 02, 2012 at 12:42:23PM -0400, Sébastien Boisvert wrote:
The Debian project is really organized, I
/lintian/checks/scripts (package lintian)
Using /usr/bin/env Rscript also throws unusual-interpreter.
See below for my specific answers.
On 11/02/2012 01:58 PM, Andreas Tille wrote:
Hi,
On Fri, Nov 02, 2012 at 12:42:23PM -0400, Sébastien Boisvert wrote:
The Debian project is really organized, I
Hi,
On 11/03/2012 01:26 PM, Andreas Tille wrote:
Hi Sébastien,
many thanks for you preparations.
On Fri, Nov 02, 2012 at 05:09:10PM -0400, Sébastien Boisvert wrote:
The Ray Debian package is now at
http://anonscm.debian.org/gitweb/?p=debian-med/ray.git;a=summary
I cloned this and think
productName &> /dev/null
RayPlatform is a separate project, but I am not sure that it
deserves its own package at this point as it is only used by
Ray as far as I know.
On 11/03/2012 10:23 PM, Charles Plessy wrote:
Le Sat, Nov 03, 2012 at 06:39:30PM -0400, Sébastien Boisvert a écrit :
The pri
Hi,
On 11/04/2012 04:42 AM, Charles Plessy wrote:
Le Sun, Nov 04, 2012 at 01:04:37AM -0400, Sébastien Boisvert a écrit :
OK, so the things in my pristine-tar branch are not good at all !
I checked the pristine-tar branch of debian-med/bwa.git, and it contains
delta between orig tarballs.
But
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