Package FTBFS everywhere, for multiple reasons but looks like the new
pytest_asyncio is at least one of them; will investigate further later.
Hi,
unfortunately I missed to announce the BoF here properly. For those
who might have missed it due to this - here is the recording:
https://gemmei.ftp.acc.umu.se/pub/debian-meetings/2020/DebConf20/22-debian-med-bof.webm
To make sure I will not make this mistake again - here is the link
t
Hi Andreas,
> Feel free to add your contribution here to this thread on the mailing
> list - I see no reason to hide it in some private mail (which is fine
anyway if you prefer this).
Thanks a lot for these efforts, and congratulations on getting your talk
selected!
These are my contributions fo
Hi Andreas,
Here are my contributions during Debian Med Sprints:
Sprint 1 (April 5 - 11)
New packages:
* trinculo
* r-bioc-htsfilter
Sprint 2 (June 15-21)
Added autopkgtests:
* ivar
* drop-seq
* flash
* pilon
* ngmlr
* wham-align
Sprint 3 (August 16-22)
Added autopkgtests:
* bio-rainbow
* maffil
Hello,
A few weeks ago, I've pushed a new package for treerecs, hoping someone
would notice and have a look.
Since I've had no luck, I'll try to push it...
Would anyone be kind enough to have a look here:
https://salsa.debian.org/med-team/treerecs ?
One thing I'm pretty sure is *not *correc
Hi Andreas,
Le 26/08/2020 à 07:13, Andreas Tille a écrit :
>>
>> BTW, snpeff depends on akka-actor, a (Scala+Java) library which still
>> has to be packaged, and I am afraid it will be blocked by the version of
>> Scala in Debian, itself being stuck to 2.11 as Scala build tool (SBT)
>> requires wo
gbp clone --pristine-tar https://salsa.debian.org/med-team/harvest-tools
OR
Grant DM access: PGP key fingerprint:
3E99A526F5DCC0CBBF1CEEA600BAE74B343369F1
Thanks and Regards
Nilesh
https://salsa.debian.org/med-team/pigx-scrnaseq
Hello,
The pigx-rnaseq waits for the acceptance of my patches for the
datatables JavaScript packages (or alternative ways to fix the
non-cooperation with rmarkdown and pandoc than adding extra symbolic
links). I now headed towards the single-cell va
Hi Pierre,
On Wed, Aug 26, 2020 at 04:40:09PM +0200, Pierre Gruet wrote:
>
> I haven't asked, since I instead got informed about what blocks Scala
> packaging in an open bug asking for packaging Scala 2.12, of which thread
>
> https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=845113
Which ends
On Wed, Aug 26, 2020 at 08:53:02PM +0530, Nilesh Patra wrote:
> Grant DM access: PGP key fingerprint:
> 3E99A526F5DCC0CBBF1CEEA600BAE74B343369F1
Granted. Thanks for your work on this, Andreas.
--
http://fam-tille.de
g...@salsa.debian.org:r-pkg-team/r-bioc-singlecellexperiment.git
Dear all,
and dear Andreas in particular,
I just completed (?) the packaging of BioC's SingleCellExperiment and
kindly request a review+upload if fits.
The package cowbuilds for me and installs. I have not come across any
indicati
Hello,
pigx-rnaseq is not ready, yet. Thank you all for your swift action on
the datatables-extensions, that is not where the problem is - it fails
already four tests earlier.
I need to investigate this further.
Steffen
Forwarded Message
Subject:Bug#968944 closed by
Second attempt uploaded.
Of the reverse dependencies with known fixes, python-feather-format has
been uploaded but q2templates hasn't.
Dear Maintainers,
For our information, do you know if it might be possible to unblock the
situation soon? Is there some ongoing work on sbt?
In Debian-med, we would be interested in having Scala 2.12 or 2.13 to
package the pre-dependency akka.
Thanks a lot in any case,
Best regards,
Pierre Grue
Hi Rebecca,
On Wed, Aug 26, 2020 at 09:42:17PM +0100, Rebecca N. Palmer wrote:
> Second attempt uploaded.
Thanks for this.
> Of the reverse dependencies with known fixes, python-feather-format has been
> uploaded but q2templates hasn't.
Could you possibly be more verbose what exactly needs to
https://salsa.debian.org/r-pkg-team/r-bioc-genomicfiles
For after DebConf.
Thanks
Steffen
gbp clone --pristine-tar https://salsa.debian.org/med-team/sigma-align
OR
Grant DM access: PGP key fingerprint:
3E99A526F5DCC0CBBF1CEEA600BAE74B343369F1
Thanks and Regards
Nilesh
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