uploading libzstd...

2018-04-21 Thread Mattia Rizzolo
[ explicitly CCing xnox, as I somehow doubt he follows d-med@ ] [ though I hope the other people mentioned hereafter are subscribed… ] So, to —putting it bluntly— cut the crap I'm seeing these last days around libzstd, I'm finalizing the upload. I'm also deleting the following tags from the git r

Re: uploading libzstd...

2018-04-21 Thread Mattia Rizzolo
On Sat, Apr 21, 2018 at 11:13:42AM +0200, Mattia Rizzolo wrote: > Alexandre Mestiashvili, Dimitri John Ledkov, Andreas Tille: please > remove them from your local checkout. I also would like to ask you to > please refrain to push tags for things you are not 100% sure are going > to be accepted (in

Re: uploading libzstd...

2018-04-21 Thread Sascha Steinbiss
Hi Mattia, thanks for diving into this! Just quickly replying as my name was mentioned... [...] > Alex Mestiashvili, Sascha Steinbiss, Kevin Murray: there are a bunch of > patches without Forwarded header, that seems like have been there for a > while. Please do some upstreaming work there. The

Re: uploading libzstd...

2018-04-21 Thread Dimitri John Ledkov
On 21 April 2018 at 10:29, Mattia Rizzolo wrote: > On Sat, Apr 21, 2018 at 11:13:42AM +0200, Mattia Rizzolo wrote: >> Alexandre Mestiashvili, Dimitri John Ledkov, Andreas Tille: please >> remove them from your local checkout. I also would like to ask you to >> please refrain to push tags for thin

Re: uploading libzstd...

2018-04-21 Thread Mattia Rizzolo
On Sat, Apr 21, 2018 at 11:15:28AM +0100, Dimitri John Ledkov wrote: > matching the most up to date package history. You need not worry about > changes to the Debian packaging history, from the point of Ubuntu > package history, as divergent packaging versions do happen in uUuntu > wrt. merging fro

Re: uploading libzstd...

2018-04-21 Thread Mattia Rizzolo
On Sat, Apr 21, 2018 at 11:56:42AM +0200, Sascha Steinbiss wrote: > thanks for diving into this! Just quickly replying as my name was > mentioned... :) > I'll address these minor issues later today, thanks for the heads-up. Thank you! > When do you want to make the upload? I already did. Pleas

Qlustar 10 available - Now 100% Open Source

2018-04-21 Thread Tony Travis
Hi, Q-Leap previously offered to support Debian-Med and they attended at least one Debian-Med Sprint. However, their product licensing policy was restrictive and I decided not to use it. However, that has now changed: > https://qlustar.com/news/qlustar-10-available-now-100-open-source Time for a

Qlustar 10 available - Now 100% Open Source

2018-04-21 Thread Tony Travis
Hi, Q-Leap sponsorted the 2014 Debian-Med Sprint in Stonehaven and attended the 2015 Sprint in St. Malo:: > https://qlustar.com/news/qlustar-biostack-debianmed-sprint-2015 I'm going to try it out, Tony. -- Minke Informatics Limited, Registered in Scotland - Company No. SC419028 Registered O

Re: uploading libzstd...

2018-04-21 Thread Alex Mestiashvili
Hi Mattia, > Alexandre Mestiashvili: you prepared the last updates (referring to > importing the new upstream releases), but it's clear you never did a > copyright review. Please always check what you imported for updates in > the copyright or the licensing details. Let me please elaborate my po

Re: uploading libzstd...

2018-04-21 Thread Mattia Rizzolo
On Sat, Apr 21, 2018 at 05:45:34PM +0200, Alex Mestiashvili wrote: > Let me please elaborate my point of view. libzstd is team-maintained, > and because I didn't see any changes in the copyright/licensing for the > new upstream versions I obviously didn't think on checking the > copyright. Especial

Re: uploading libzstd...

2018-04-21 Thread Alex Mestiashvili
On 04/21/2018 06:48 PM, Mattia Rizzolo wrote: > On Sat, Apr 21, 2018 at 05:45:34PM +0200, Alex Mestiashvili wrote: >> Let me please elaborate my point of view. libzstd is team-maintained, >> and because I didn't see any changes in the copyright/licensing for the >> new upstream versions I obviously

Re: uploading libzstd...

2018-04-21 Thread Mattia Rizzolo
On Sat, Apr 21, 2018 at 10:24:47PM +0200, Alex Mestiashvili wrote: > Now I got it, also opened an issue: > https://github.com/facebook/zstd/issues/ Thanks for it! Feel free to tag me (@mapreri - or just notify me somehow) if you'd like to see my input on something there. -- regards,

RFS: ChromImpute -- Large-scale systematic epigenome imputation

2018-04-21 Thread Dylan Aïssi
Hi, Could someone upload it? Thanks. Best, Dylan Package name: chromimpute URL: http://www.biolchem.ucla.edu/labs/ernst/ChromImpute/ License: GPL-2 Description: Large-scale systematic epigenome imputation ChromImpute takes an existing compendium of epigenomic data and uses it to predict signa