Re: Role of SHOGUN in Debian Med

2013-01-25 Thread Andreas Tille
Hi Soeren, On Thu, Jan 24, 2013 at 10:39:54PM +0100, Soeren Sonnenburg wrote: > the issue with shogun & debian currently is that it requires ~3.5GB of > memory to compile for some of its interfaces. Build bots where choking > on this so I have no idea what to do about it. That is the reason I gave

Re: Re: Flexbar source code?

2013-01-25 Thread Johannes Röhr
Hi Andreas, Tony asked me to join discussion on Flexbar packaging. I'm not sure if the stable SeqAn 1.3.1 package release misses functionality that I rely on, or if the behaviour of functions changed even if it compiles with this release. For example the new ArgumentParser has been added rather

[FIS-GTM] Packing V6.0-001 - Status Update

2013-01-25 Thread Amul Shah
I'm writing this mail so that interested parties know where this work stands. I had a call today (2013/01/25) with Luis Ibanez and Brad King from Kitware to get up to speed on the packaging for GT.M (thanks!). * I have an account and uploaded an SSH-key so that I can checkout and commit (than

Re: Flexbar source code?

2013-01-25 Thread Andreas Tille
Hi Johannes, many thanks for getting involved. On Fri, Jan 25, 2013 at 03:11:23PM +0100, Johannes Röhr wrote: > Tony asked me to join discussion on Flexbar packaging. I'm not sure if the > stable SeqAn 1.3.1 package release misses functionality that I rely on, or if > the behaviour of functions

Re: [FIS-GTM] Packing V6.0-001 - Status Update

2013-01-25 Thread Andreas Tille
Hi Amul, On Fri, Jan 25, 2013 at 02:45:11PM -0500, Amul Shah wrote: > I'm writing this mail so that interested parties know where this work stands. > > I had a call today (2013/01/25) with Luis Ibanez and Brad King from Kitware > to get up to speed on the packaging for GT.M (thanks!). > > * I

Re: [FIS-GTM] Packing V6.0-001 - Status Update

2013-01-25 Thread Luis Ibanez
On Fri, Jan 25, 2013 at 5:14 PM, Andreas Tille wrote: > That's really great news! I hope Luis did not forget that we try to > support your attempt as best as we can. > Definitely have not forgotten all the help... :-) ...and how useful the MoM program was to make this possible. Chee