Re: Bug#692498: ITP: bamtools -- C++ API and toolkit for manipulating BAM (genome alignment) files

2012-11-09 Thread Dominique Belhachemi
On Thu, Nov 8, 2012 at 3:56 AM, Andreas Tille wrote: > > Would you consider to create a bamtools-tools (well, this sounds like a > stupid name - perhaps only bam-tools or bamtools-utils - whatever might > sound intuitive to you) package? For similarity issues I checked samtools > which is formal

Re: Bug#692498: ITP: bamtools -- C++ API and toolkit for manipulating BAM (genome alignment) files

2012-11-09 Thread Andreas Tille
Hi, On Fri, Nov 09, 2012 at 09:01:04AM -0500, Dominique Belhachemi wrote: > > Would you consider to create a bamtools-tools (well, this sounds like a > > stupid name - perhaps only bam-tools or bamtools-utils - whatever might > > sound intuitive to you) package? For similarity issues I checked sa

Re: Bug#692498: ITP: bamtools -- C++ API and toolkit for manipulating BAM (genome alignment) files

2012-11-09 Thread Dominique Belhachemi
On Fri, Nov 9, 2012 at 9:43 AM, Andreas Tille wrote: > Hi, > > On Fri, Nov 09, 2012 at 09:01:04AM -0500, Dominique Belhachemi wrote: > > > Would you consider to create a bamtools-tools (well, this sounds like a > > > stupid name - perhaps only bam-tools or bamtools-utils - whatever might > > > so

Re: Bug#692498: ITP: bamtools -- C++ API and toolkit for manipulating BAM (genome alignment) files

2012-11-09 Thread Andreas Tille
On Fri, Nov 09, 2012 at 10:33:03AM -0500, Dominique Belhachemi wrote: > > > > So the last remaining questions are: > > > >1. Can we fix the pristine-tar branch properly (to exclude third_party) > > or would it possibly less work to recreate the Git repository (I > > personally would

Velvet moved to Git?

2012-11-09 Thread Andreas Tille
Hi Charles, I noticed that Velvet is now in Git and it has a more recent change than the packaging in SVN. If this is a definite move I'd welcome if you would remove velvet from SVN (and drop a README.status as for the other moved packages). If you have time constraints just confirm and I'll do

Re: Bug#692498: ITP: bamtools -- C++ API and toolkit for manipulating BAM (genome alignment) files

2012-11-09 Thread Dominique Belhachemi
On Fri, Nov 9, 2012 at 10:38 AM, Andreas Tille wrote: > On Fri, Nov 09, 2012 at 10:33:03AM -0500, Dominique Belhachemi wrote: > > > > > > So the last remaining questions are: > > > > > >1. Can we fix the pristine-tar branch properly (to exclude > third_party) > > > or would it possibly