[help] vdjtools autopkgtest fails

2022-11-26 Thread Andreas Tille
Hi Pierre, when fixing the watch file I stumbled upon an autopkgtest error[1]. Do you have an idea what might be wrong here? Kind regards Andreas. [1] https://salsa.debian.org/med-team/vdjtools/-/jobs/3581757 -- http://fam-tille.de

Re: [Help] Build issue of latest version of libsbml (probably Java compatibility issue)

2022-11-26 Thread Andreas Tille
Hi Pierre, Am Sat, Nov 26, 2022 at 03:30:27PM +0100 schrieb Pierre Gruet: > Done! Indeed there was an import of an empty set of Java classes, I repaired > this. Also I added a missing #include in another set of bindings. I > submitted my patches upstream. Thanks a lot! > Now dh_auto_build succee

Re: [Help] Build issue of latest version of libsbml (probably Java compatibility issue)

2022-11-26 Thread Pierre Gruet
Hi Andreas, Le 25/11/2022 à 10:57, Andreas Tille a écrit : Hi, I just realised that libsbml moved to Github. After fixing the watch file I tried to package the latest upstream version. Unfortunately the build fails and I see the lines /builds/med-team/libsbml/debian/output/source_dir/src/bin

Re: python3-biopython: incompatible with muscle >= 5

2022-11-26 Thread Étienne Mollier
Control: severity 1022307 normal Hi Andreas, Andreas Tille, on 2022-11-25: > Am Thu, Nov 24, 2022 at 10:35:06PM +0100 schrieb Étienne Mollier: > > > > python-biopython 1.80 is uploaded to experimental and should > > build soon[1], if this is not the case already. I haven't had a > > lot of oppo