Re: Now we have antlr 4.6 - any chance to get 4.7 soon (Was: beast-mcmc2: Cannot find symbol CharStreams.fromString(newick))

2018-10-15 Thread Andrius Merkys
right now. Best, Andrius -- Andrius Merkys Vilnius University Institute of Biotechnology, Saulėtekio al. 7, room V325 LT-10257 Vilnius, Lithuania

Re: Now we have antlr 4.6 - any chance to get 4.7 soon (Was: beast-mcmc2: Cannot find symbol CharStreams.fromString(newick))

2018-10-17 Thread Andrius Merkys
join the Debian Med sprint in March 2019 > which will happen in Vilnius[1] (no better details yet). Thanks, I will be there. Best, Andrius -- Andrius Merkys Vilnius University Institute of Biotechnology, Saulėtekio al. 7, room V325 LT-10257 Vilnius, Lithuania

Re: Now we have antlr 4.6 - any chance to get 4.7 soon (Was: beast-mcmc2: Cannot find symbol CharStreams.fromString(newick))

2018-10-19 Thread Andrius Merkys
https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=911371 -- Andrius Merkys Vilnius University Institute of Biotechnology, Saulėtekio al. 7, room V325 LT-10257 Vilnius, Lithuania

Re: Now we have antlr 4.6 - any chance to get 4.7 soon (Was: beast-mcmc2: Cannot find symbol CharStreams.fromString(newick))

2018-10-24 Thread Andrius Merkys
On 10/24/18 1:40 PM, Emmanuel Bourg wrote: > I've uploaded mojo-executor and string-template-maven-plugin, they are > awaiting in the NEW queue for the FTP masters approval. Thanks a lot > Andrius. Many thanks for reviewing and uploading the packages! Best, Andrius

Re: java: building interdependent artifacts with maven

2018-12-30 Thread Andrius Merkys
10:30, Andrius Merkys > wrote: > > I am preparing a package for apache-opennlp [1]. Building it results in > six artifacts, one of them, > org.apache.opennlp:opennlp-morfologik-addon:jar:1.9.0, depends on another > artifact org.apache.opennlp:opennlp-tools:jar:debian which is b

Re: Help needed with morfologik

2019-01-02 Thread Andrius Merkys
andrius andrius 40 Jan  2 03:17 morfologik-fsa-debian.pom -> ../../../../../../morfologik-fsa/pom.xml Thus this might be used to solve the interdependency problem. However, this method looks more like a hack and I expect maven-debian-helper to have some built-ins for this. Best, Andrius

Re: Help needed with morfologik

2019-01-02 Thread Andrius Merkys
ideas how to fix this? I would like to investigate the issue myself, but cannot figure out how to get to the build. Best, Andrius -- Andrius Merkys Vilnius University Institute of Biotechnology, Saulėtekio al. 7, room V325 LT-10257 Vilnius, Lithuania

Request to join Debian Java Packaging Project

2019-04-01 Thread Andrius Merkys
accept the project rules [1]. Best wishes, Andrius [1] https://java.debian.net/developers.html -- Andrius Merkys Vilnius University Institute of Biotechnology, Saulėtekio al. 7, room V325 LT-10257 Vilnius, Lithuania

Re: Request to join Debian Java Packaging Project

2019-04-01 Thread Andrius Merkys
Dear Markus, On 2019-04-01 16:39, Markus Koschany wrote: > You just needed the "maintainer" status. I've granted it a minute ago. > Welcome on board! Thanks a lot for adding me! Best wishes, Andrius -- Andrius Merkys Vilnius University Institute of Biotechnology, Saulėt

Re: Request to join Debian Java Packaging Project

2019-04-01 Thread Andrius Merkys
Best wishes, Andrius -- Andrius Merkys Vilnius University Institute of Biotechnology, Saulėtekio al. 7, room V325 LT-10257 Vilnius, Lithuania

Re: [OT] Cannot use the Java offline utility given at https://www.incometaxindiaefiling.gov.in/downloads/offlineUtilities?lang=eng

2019-04-16 Thread Andrius Merkys
Hello, On 2019-04-17 09:35, shirish शिरीष wrote: > I don't think it's just an openjdk issue, it's probably something to > do with the class as it shows - > > com.itd.efiling.offline.common.player.ctrl.ThreeRedLightsIlluminate to me this looks like a problem with the CLASSPATH. Does ThreeRedLights

Re: [OT] Cannot use the Java offline utility given at https://www.incometaxindiaefiling.gov.in/downloads/offlineUtilities?lang=eng

2019-04-17 Thread Andrius Merkys
On 2019-04-17 09:52, shirish शिरीष wrote: > ~/Documents/ITR-1_2019_170419$ cat ITR.sh > java -jar ITR-1_AY201920_PR1.jar OK, this means that all required classes should be there in the JAR file. Could you check what does 'jar -tvf ITR-1_AY201920_PR1.jar | grep ThreeRedLightsIlluminate' say? Best,

Re: [OT] Cannot use the Java offline utility given at https://www.incometaxindiaefiling.gov.in/downloads/offlineUtilities?lang=eng

2019-04-17 Thread Andrius Merkys
Dear Shirish, On 2019-04-17 10:19, shirish शिरीष wrote: > ~/Documents/ITR-1_2019_170419$ jar -tvf ITR-1_AY201920_PR1.jar | grep > ThreeRedLightsIlluminate > 1699 Mon Apr 15 19:26:26 IST 2019 > com/itd/efiling/offline/common/player/ctrl/ThreeRedLightsIlluminate$1.class > 3599 Mon Apr 15 19:26:2

Re: Help needed to upgrade cdk

2019-11-20 Thread Andrius Merkys
Hi Andreas, On Wed, 20 Nov 2019, 22:19 Andreas Tille, wrote: > I have no idea what restrictions the lack of cmlxom might imply. > I have packaged and uploaded cmlxom today. Will do so with the rest of dependencies. Would you take over and upload your changes? If not please push and > let me k

Re: Help to detect java classes in drop-seq (covid-19 relevant) needed

2020-05-20 Thread Andrius Merkys
Hi Andreas, On 2020-05-20 14:20, Andreas Tille wrote: > Any hint how to take this hurdle would be welcome. Try setting the CLASSPATH in your d/rules like this: export CLASSPATH := $(DEBJAR)/htsjdk.jar:$(DEBJAR)/picard.jar:$(DEBJAR)/commons-collections4.jar I did this in one of packages and it s

Re: Java packages and autopkgtest

2020-12-07 Thread Andrius Merkys
Hello, On 2020-12-07 18:52, Thorsten Glaser wrote: > On Tue, 8 Dec 2020, Roger Shimizu wrote: > >> do you have any suggestion on such case, the autopkgtest for java or >> just maven library pkg? > > Sorry but really none. Those packages I’ve seen so far only worked > because they disabled the te

Re: packaging Go runtime for ANTLR4

2021-07-29 Thread Andrius Merkys
Hello, Maintainer of antlr4-cpp-runtime here. On 2021-07-28 22:36, Nilesh Patra wrote: > 2) Do "$something-else" for all these packages to stay in sync - again, > probably bumping versions only when needed. > With this approach, I do not see a problem in introducing a Go runtime > source package

Divergence in salsa.debian.org/java-team/xom

2021-08-25 Thread Andrius Merkys
Hello, I want to make an upload for xom package with a couple of fixes. I want to use its packaging repository on salsa [1], but it is in somewhat diverged state. The newest Debian version of xom is 1.2.10-1.1, but repository on salsa has 1.2.10-1 (note incorrect git tag) plus a pair of commits on

Re: Divergence in salsa.debian.org/java-team/xom

2021-08-25 Thread Andrius Merkys
Hi Sebastiaan, On 2021-08-25 12:32, Sebastiaan Couwenberg wrote: > Import the changes from the NMU: > > gbp import-dsc /tmp/xom_1.2.10-1.1.dsc > > Review the changes since -1: > > git diff debian/1.2.10-1{,.1} debian/ > > Restore changes that were reverted by the NMU import. Thanks, I will

Re: Old Gradle version

2021-09-14 Thread Andrius Merkys
Hi, On 2021-09-15 00:59, Philippe De Neve wrote: > I was wondering why the Gradle version in buster/bullseye/bookworm/sid > is 4.4.1. Latest release is 7.2. Please see these bug reports for reference: https://bugs.debian.org/926714 https://bugs.debian.org/933264 Best, Andrius

maven-*-helper JAR placement seems to contradict Java policy

2021-10-15 Thread Andrius Merkys
Hello, Java policy on Java libraries (Ch. 2.4.) reads [1]: Their classes must be in jar archive(s) in the directory /usr/ share/java, with the name packagename[-extraname] -fullversion.jar. The extraname is optional and used internally within the package to separate the different

Re: maven-*-helper JAR placement seems to contradict Java policy

2021-10-15 Thread Andrius Merkys
Hi Markus, On 2021-10-15 14:34, Markus Koschany wrote: > Indeed, that looks like a bug in libcommons-lang3-java or rather maven-debian- > helper to me. I have just checked some other Maven packages and there the > policy is implemented correctly. The bug in libcommons-lang3-java could be > related

Bug#996727: ITP: ciftools-java -- Java library to read and write CIF files

2021-10-17 Thread Andrius Merkys
Hi Pierre, On 2021-10-17 22:18, Pierre Gruet wrote: > * Package name: ciftools-java > Version : 3.0.0 > Upstream Author : Sebastian Bittrich > * URL : https://github.com/rcsb/ciftools-java > * License : Expat > Programming Lang: Java > Description : Java

Re: maven-*-helper JAR placement seems to contradict Java policy

2021-10-18 Thread Andrius Merkys
Hi, On 2021-10-18 10:31, Alexandre Rossi wrote: >>> Not sure though what is the impact of this policy inversion. Most of >>> Java-related software seems to read both regular files and symbolic >>> links transparently. >> >> There isn't much impact, both styles are fine in my opinion. > > This see

Re: maven-*-helper JAR placement seems to contradict Java policy

2022-03-28 Thread Andrius Merkys
Hi Alexandre, On 2022-03-23 16:33, Alexandre Rossi wrote: > Seems to work: > > $ ls -la /usr/share/java/htmlcleaner* > lrwxrwxrwx 1 root root 15 18 mars 18:20 > /usr/share/java/htmlcleaner-2.26.jar -> htmlcleaner.jar > -rw-r--r-- 1 root root 176219 18 mars 18:20 /usr/share/java/htmlc

antlr 4.10 released [Was: Re: packaging Go runtime for ANTLR4]

2022-04-13 Thread Andrius Merkys
Hello, Some time ago there was a discussion about the need to coordinate uploads of antlr and its runtime packages, as in Debian they are split into several source packages across several teams: On 2021-07-29 10:09, Andrius Merkys wrote: > Maybe an antlr4 packaging team could be set up

Re: Gradle problems when building adql-java package

2023-12-08 Thread Andrius Merkys
Hi Ole, On 2023-12-08 13:03, Ole Streicher wrote: I am trying to update the adql-java package to the newest upstream (beta) version. As it is my first project using gradle, I sumbled upon a number of problems: One is that the plugin org.javacc.javacc is not available. I guess this is because it

Re: Contacting Java packaging team

2024-06-26 Thread Andrius Merkys
Hello, On 2024-06-26 00:06, Emmanuel Bourg wrote: Le 17/06/2024 à 08:16, Andreas Tille a écrit : The problems Pierre described with upgrading Gradle might be some indication that some more skilled packagers could help. We would need a core Gradle and/or Kotlin developer to tackle this issue

Re: Contacting Java packaging team

2024-06-26 Thread Andrius Merkys
Hello, I am running late to this discussion, but thought I could share my personal thoughts as a data point. On 2024-06-12 18:27, Andreas Tille wrote: I have some specific questions to the Java packaging team. - Do you feel good when doing your work in Java packaging team? Yes. I attrib

What do we do with removed packages on salsa?

2024-09-12 Thread Andrius Merkys
Hello, Recently I had one of my packages removed from unstable. I would like to know what is the team's practice of dealing with repositories of such packages on salsa. I saw that some other teams have sub-namespaces like /attic/ for packaging repositories of removed packages in order to pres

Re: What do we do with removed packages on salsa?

2024-09-16 Thread Andrius Merkys
Hi Emmanuel, On 2024-09-13 11:14, Emmanuel Bourg wrote: On 12/09/2024 09:26, Andrius Merkys wrote: Recently I had one of my packages removed from unstable. I would like to know what is the team's practice of dealing with repositories of such packages on salsa. I saw that some other

Re: Bug#1081606: debian/maven.rules help needed for cdk

2024-09-30 Thread Andrius Merkys
Hi Emmanuel, On 2024-09-28 00:51, Emmanuel Bourg wrote: Le 27/09/2024 à 14:47, Andrius Merkys a écrit : cdk-data is an artifact of the same project, however, I cannot make maven detect it. I am almost sure the problem is due to some misconfiguration in debian/maven.rules, but I cannot find

debian/maven.rules help needed for cdk

2024-09-27 Thread Andrius Merkys
Hello, I am trying to enable tests for cdk package on branch on salsa [1]. Build is failing with the following: [INFO] [INFO] BUILD FAILURE [INFO] ---

Re: What do we do with removed packages on salsa?

2024-09-17 Thread Andrius Merkys
On 2024-09-16 23:12, Emmanuel Bourg wrote: We have the same roles on the debian-java group, so I assume the same permissions too. Did you unfold the Advanced tab on the settings page ? Yes, I did. Under "Advanced" tab it says "Housekeeping, export, *archive*, change path, transfer, and delete.