Hi Gurudatt,
If the alignment of the tilt series is already good enough (this also applies
to .ali stacks from IMOD), you can run eman2 tomogram reconstruction using the
—noali and —niter=0 options, which will just reconstruct your tilt series in
their current alignment. Note that the tilt axis
Dear Lionel,
If you want a programme that takes a PDB file and automatically generates a
topology diagram, then Pro-origami may be the software you need
(https://sites.google.com/site/alexdstivala/home/pro-origami) - it generates
prettier diagrams than PDBsum, and the diagrams are output as .sv
