[ccp4bb] Connecting DNA between asymmetric units?

2023-07-31 Thread Ronnie Berntsson
Hi all, We have recently solved a structure of a DNA binding protein in complex with DNA to ca 2.5 Å. The space group is P212121 and contains 3 protein molecules in the asymmetric unit (current Rwork/Rfree = 20.4/24.1). The protein was crystallized together with a 60 bases long poly-A oligo (ss

[ccp4bb] 3D-Beacons update: Search for structural models by protein sequence

2023-07-31 Thread David Armstrong
Dear ccp4bb, The 3D-Beacons resource has undergone some major improvements, including updates to the API and a new sequence search feature. The 3D-Beacons Network, originally announced in September 2021

[ccp4bb] wwPDB News: Updated Annotation and Standardization of Peptide Residues

2023-07-31 Thread Deborah Harrus
Dear all, In October 2023, the wwPDB will roll out updated Chemical Component Dictionary (CCD) data files with standardized atom naming and additional annotation of protein backbone and terminal atoms within peptide residues. Entries containing those updated CCDs will also be updated accordin

Re: [ccp4bb] Beamline Scientist position at Diamond Light Source

2023-07-31 Thread Hall, Dave (DLSLtd,RAL,LSCI)
Hi I would like to remind you the closing date for applications for this Beamline Scientist post at Diamond is this coming Sunday (6th August). Best wishes Dave From: Hall, Dave (DLSLtd,RAL,LSCI) Date: Thursday, 20 July 2023 at 09:14 To: ccp4bb Subject: Beamline Scientist position at Diamond