Re: [ccp4bb] xds undefined data_range error

2009-06-11 Thread Kay Diederichs
Sangeetha Vedula schrieb: Thank you so much for your detailed reply. It did run now, but not being able to see if it found the spots right makes me nervous. I'll try to get xdsviewer to work. Posting the helper program in the wiki will be very useful. I for one would definitely look forward t

Re: [ccp4bb] xds undefined data_range error

2009-06-11 Thread Kay Diederichs
Hi Sangeetha, 1) when I open the XDS.INP that you posted with a text-mode program like vi , it looks very messy - like one long line, with ctrl-M control characters at the putative linebreaks. I just realize that Tim Grüne found that out in the same way! 2) Christopher Buhl's JOB= line does no

Re: [ccp4bb] xds undefined data_range error

2009-06-11 Thread Sangeetha Vedula
I am just now editing it again using nedit. I edited it before in textedit. That was probably my problem! And no, when I look at it using more, it is all messed up. I edited Chris's file. New error. !!! ERROR !!! CANNOT READ XPARM.XDS So now, I followed Jurgen's advice of JOB=ALL and it is runn

Re: [ccp4bb] xds undefined data_range error

2009-06-11 Thread Jürgen Bosch
Hi, you should remove the following lines: SPOT_RANGE=7 18 !First and last data image number for finding spots SPOT_RANGE=20 20 !First and last data image number for finding spots and instead define the spot range only in one line e.g. SPOT_RANGE=1 50 That should fix your pro

Re: [ccp4bb] xds undefined data_range error

2009-06-11 Thread Sangeetha Vedula
Thank you. Unfortunately, it doesn't work even now. On Thu, Jun 11, 2009 at 11:47 AM, Jürgen Bosch wrote: > Hi,you should remove the following lines: > > SPOT_RANGE=7 18 !First and last data image number for finding spots > SPOT_RANGE=20 20 !First and last data image number for fin

Re: [ccp4bb] xds undefined data_range error

2009-06-11 Thread Christopher Bahl
Hi Sangeetha, Here is an XDS.INP that I recently used to process data from X6A; you could try inputing your parameters in this file (or at least compare the two). Hope that helps, and good luck! -Chris -- Christopher Bahl Dartmouth Biochemistry 7200 Vail Bldg. Hanover, NH 03755 Phone: (603) 6

Re: [ccp4bb] xds undefined data_range error

2009-06-11 Thread Sangeetha Vedula
I checked: 1. I did name it XDS.INP; no problem there. 2. The path along with file name template is only about 30 characters. 3. No. of files = 156 (DATA_RANGE=1 156) 4. Edited Nx, Ny, Qx, Qy (unless the image header is wrong, which could cause problems, but why does it have a problem with data ra

Re: [ccp4bb] xds undefined data_range error

2009-06-11 Thread Kay Diederichs
Sangeetha Vedula schrieb: Hello all, Apologies for the non-CCP4 question. I am trying to process some data collected at X6A in March. I edited the XDS.inp file for ADSC detector. When I try to run xds, however, it gives an error immediately: !!! ERROR !!! UNDEFINED DATA_RANGE= I checked th

Re: [ccp4bb] xds undefined data_range error

2009-06-10 Thread Petr Kolenko
Hello, I had a similar problem, maybe the same error message. I think, the line NAME_TEMPLATE_OF_DATA_FRAMES=?? should be as short as possible (48 characters or something). There was a limitation of number of characters (maybe fixed in newest versions of XDS). I would creat

Re: [ccp4bb] xds undefined data_range error

2009-06-10 Thread Tim Gruene
Hello, What is the actual data range at the particular line? Maybe you could append your XDS.INP to send it to the board for inspection? Did you really name the file XDS.inp? As far as I understand, xds will be looking for all upper case characters, so XDS.inp might not be read at all. Ar

[ccp4bb] xds undefined data_range error

2009-06-10 Thread Sangeetha Vedula
Hello all, Apologies for the non-CCP4 question. I am trying to process some data collected at X6A in March. I edited the XDS.inp file for ADSC detector. When I try to run xds, however, it gives an error immediately: !!! ERROR !!! UNDEFINED DATA_RANGE= I checked the data range and the image path