[ccp4bb] Summary: [ccp4bb] pi-pi R stacking

2010-03-09 Thread Phoebe Rice
Many thanks to all who suggested references! Phoebe From: Matthew Merski Matthew Merski Postdoc, Shoichet Group UCSF The Molecular Origin of Like-Charge Arginine-Arginine Pairing in Water JiĆ­ Vondrek, Philip E. Mason, Jan Heyda, Kim D. Collins and Pavel Jungwirth J. Phys. Chem. B, 2009, 113

[ccp4bb] pi-pi R stacking

2010-03-05 Thread Phoebe Rice
I'm looking for references where people have tried to at least vaguely quantify the energetics of stacking the guanidinium groups of two R's. I'm looking at 3 cases in protein-protein interfaces, and in each one there's a D or E adjacent, which presumably helps with the charge-charge repulsion. Hi