Re: [ccp4bb] off-topic: protein losing FAD during purification

2014-03-14 Thread ramesh vandanapu
Dear All On similar lines any suggestions and tips on expression and purification of the proteins containing both FAD and NADPH would be really helpful. I recently tried to express and purify a protein containing these two ligands, but failed (aggregation of protein). my initial questions are

Re: [ccp4bb] off-topic: protein losing FAD during purification

2014-03-14 Thread Orru, Roberto
K] On Behalf Of Benini Stefano (P) Sent: 13 March, 2014 18:40 To: CCP4BB@JISCMAIL.AC.UK Subject: [ccp4bb] off-topic: protein losing FAD during purification Dear All (those dealing with wetlab stuff..), While purifying a FAD containing protein we lose part of the FAD (on the gel filtration we clearl

Re: [ccp4bb] off-topic: protein losing FAD during purification

2014-03-14 Thread R. M. Garavito
Stefano, Before you address the problem, you need to ask yourself a couple of things. You say that "on the gel filtration we clearly see two bands corresponding to holoprotein and free FAD." That is not too odd, but have you ask the question is all the protein good protein. Is this an enzy

Re: [ccp4bb] off-topic: protein losing FAD during purification

2014-03-14 Thread Boaz Shaanan
, March 14, 2014 12:40 AM To: CCP4BB@JISCMAIL.AC.UK Subject: [ccp4bb] off-topic: protein losing FAD during purification Dear All (those dealing with wetlab stuff..), While purifying a FAD containing protein we lose part of the FAD (on the gel filtration we clearly see two bands corresponding to

Re: [ccp4bb] off-topic: protein losing FAD during purification

2014-03-13 Thread Vivoli, Mirella
Dr. Stefano, 1) I would add FAD in all buffers after lysis,even after GF you could perform dialysis with buffer supplemented with FAD. 2)for the second question I found this paper which could be helpful: Large-scale preparation and reconstitution of apo-flavoproteins with special reference to but

Re: [ccp4bb] off-topic: protein losing FAD during purification

2014-03-13 Thread Edward A. Berry
8-646-1710 From: CCP4 bulletin board [CCP4BB@JISCMAIL.AC.UK] on behalf of Benini Stefano (P) [stefano.ben...@unibz.it] Sent: Friday, March 14, 2014 12:40 AM To: CCP4BB@JISCMAIL.AC.UK Subject: [ccp4bb] off-topic: protein losing FAD during purification Dear

Re: [ccp4bb] off-topic: protein losing FAD during purification

2014-03-13 Thread Singh, Harkewal
In cases like this, I keep FAD around during all steps starting from cell lysis, purification, dialysis and even crystallization. In one case we added FAD to protein such that the protein: FAD ratio was 1 prior to setting up crystallization trials. Hope that helps. Harkewal Sent from my iPad

Re: [ccp4bb] off-topic: protein losing FAD during purification

2014-03-13 Thread Boaz Shaanan
o (P) [stefano.ben...@unibz.it] Sent: Friday, March 14, 2014 12:40 AM To: CCP4BB@JISCMAIL.AC.UK Subject: [ccp4bb] off-topic: protein losing FAD during purification Dear All (those dealing with wetlab stuff..), While purifying a FAD containing protein we lose part of the FAD (on the gel filtration we cl

[ccp4bb] off-topic: protein losing FAD during purification

2014-03-13 Thread Benini Stefano (P)
Dear All (those dealing with wetlab stuff..), While purifying a FAD containing protein we lose part of the FAD (on the gel filtration we clearly see two bands corresponding to holoprotein and free FAD). We obtain crystals but diffracting to only about 4 A despite their beautiful look. Our hypot