Re: [ccp4bb] how to change DNA bases in pdb to match the target DNA sequence

2011-11-21 Thread Tim Gruene
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Dear Wei, you could use coot "Calculate->Model/Fit/Refine->Simple Mutate" also for nucleic acids. It may be worth running geometry idealisation in coot or refmac5 before using the model in MR. Tim On 11/19/2011 09:44 PM, Wei Shi wrote: > Hi all, > I

[ccp4bb] how to change DNA bases in pdb to match the target DNA sequence

2011-11-19 Thread Wei Shi
Hi all, I want to change a piece of DNA in pdb file to match the target DNA sequence in order to be used as a search model in molecular replacement. Does anyone happen to know how I could do this? Thank you so much! Best, Wei