Re: [ccp4bb] Revise Your Structure Without Changing the PDB Accession Code and Related Changes to the FTP Archive

2017-05-18 Thread Eleanor Dodson
This is excellent news - we have a series of related structures solved in the YSBL - several sets of which are on different crystallographic origins. It doesnt matter of course crystallographically but is confusing for comparison.. Now we can alter them to a common origin with redepositing the info

Re: [ccp4bb] Revise Your Structure Without Changing the PDB Accession Code and Related Changes to the FTP Archive

2017-05-18 Thread Jasmine Young
Hi Ed, The PDB accession code will be based on the primary data stored in the PDB. Therefore depositors will need to make a new deposition with new PDB accession code issued if the atomic coordinates are modified using newly processed intensities from the original diffraction images. More d

Re: [ccp4bb] Revise Your Structure Without Changing the PDB Accession Code and Related Changes to the FTP Archive

2017-05-17 Thread Edward A. Berry
Couple of wuestions: What is the procedure for updating an entry? Start a new submission, or mail revised coordinates along with an explanation of changes to deposit@rcsb? "unchanged experimental data" - does this mean the exact same structure factors, or will newly reduced data from the same o

[ccp4bb] Revise Your Structure Without Changing the PDB Accession Code and Related Changes to the FTP Archive

2017-05-17 Thread Jasmine Young
The wwPDB is planning to introduce in 2017 a new procedure for the management by the Depositor of Record (where the Depositor of Record is defined as the Principal Investigator for the entry) of substantial revisions to previously released PDB archival entries. At present, revised atomic coord

Re: [ccp4bb] Revise

2008-04-16 Thread Stein, ND (Norman)
008 19:03 To: CCP4BB@JISCMAIL.AC.UK Subject: [ccp4bb] Revise Dear All I'm trying to locate heavy atoms. SO I started with Revise from CCP4. But it fails with error message #CCP4I TERMINATION STATUS 0 " REVISE: Duplicate column labels in output file" #CCP4I TERMINATION TIME 15 Apr

[ccp4bb] Revise

2008-04-15 Thread sajid akthar
Dear All I'm trying to locate heavy atoms. SO I started with Revise from CCP4. But it fails with error message #CCP4I TERMINATION STATUS 0 " REVISE: Duplicate column labels in output file" #CCP4I TERMINATION TIME 15 Apr 2008 14:50:34 #CCP4I MESSAGE Task failed Any help pls Thanks Sajid