Re: [ccp4bb] Questions regarding MTZFIX and EDSTATS

2020-06-16 Thread Ian Tickle
Hi Joao Can you post the mtzdmp output? Cheers Ian On Tue, 16 Jun 2020, 09:30 Joao Ramos, wrote: > Dear Ian, > > I'm trying to use the edstats.pl script but I'm having problems with the > column labels. mtzdmp can read the mtz file, but edstats.pl gives me a > message saying that mtzfix can

Re: [ccp4bb] Questions regarding MTZFIX and EDSTATS

2020-06-16 Thread Joao Ramos
Dear Ian, I'm trying to use the edstats.pl script but I'm having problems with the column labels. mtzdmp can read the mtz file, but edstats.pl gives me a message saying that mtzfix cannot find the labels. I'm using a mtz file from a refinement job in Phenix. Best regards, Joao Ramos Ian Tickle

Re: [ccp4bb] Questions regarding MTZFIX and EDSTATS

2020-06-16 Thread Ian Tickle
Hi João In cases like this it's always a good idea to check whether you can read the same MTZ file with mtzdmp. If that fails with the same error message it means that the pathname/filename was indeed incorrectly specified, or it could possibly be a permissions issue (the file needs to be given r

Re: [ccp4bb] Questions regarding MTZFIX and EDSTATS

2020-06-15 Thread Ian Tickle
Hi Joao The top of the page was cut off in your screenshot so I can't see the command line you typed. It would be better to copy/paste the entire text, including the input command line and the output, into the email rather than taking a screenshot. 'Cannot open file' most likely means that the i

Re: [ccp4bb] Questions regarding MTZFIX and EDSTATS

2020-06-15 Thread Ian Tickle
Hi Joao For all CCP4 programs you need to source your CCP4 setup script. Cheers -- Ian On Mon, 15 Jun 2020 at 15:29, Joao Ramos wrote: > Dear CCP4bb, > > I'm trying to obtain RSC metrics using the CCP4 program EDSTATS for a > Phenix refinement job, in order to have a more reliable analysis o

[ccp4bb] Questions regarding MTZFIX and EDSTATS

2020-06-15 Thread Joao Ramos
Dear CCP4bb, I'm trying to obtain RSC metrics using the CCP4 program EDSTATS for a Phenix refinement job, in order to have a more reliable analysis of model quality. From what I read, one should go through the program MTZFIX and then create the FFT maps (density and difference maps). However, whil